| Protein: | ph-d-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ph-d-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..1097] | [1530..6] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MPHGFGAAPS VSVSGDTESE SATTIRTPPP SPEATTSVKV NSTTRVDPQR PLRCLETLAQ 60
61 KAGISFDED
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [70-132] |
1 11 21 31 41 51
| | | | | |
1 FAKSPSQSPS SKAARGSVGT PSIRRRHPLL PLSSRSPSAP DSKTTGRKLE KSQSPAQQVA 60
61 AAT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [133-243] |
1 11 21 31 41 51
| | | | | |
1 NVPLQISPEQ LQQLYANNPY AIQVKQEFPT HTTSGSGTEL KHATNIMEVQ QQLQLQQQLS 60
61 EANGGGAASA GAGGAASPAN SQQSQQQQHS TAISTMSPMQ LAAATGGVGG D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [244-485] |
1 11 21 31 41 51
| | | | | |
1 WTQGRTVQLM QPSTSFLYPQ MIVSGNLLHP GGLGQQPIQV ITAGKPFQGN GPQMLTTTTQ 60
61 NAKQMIGGQA GFAGGNYATC IPSNHNQSPQ TVLISPVNVI SHSPQQQQNL LQSMAAAAQQ 120
121 QQLTQQQQQQ LNQQQQQLNQ QQQQQQLTAA LAKVGVDAQG KLAQKVVQKV TTTSSTVQAA 180
181 TGPGSTGSTQ TQQVQQVQQQ QQQTTQTTQQ CVQVSQSTLP VGVGGQSVQT AQLLNAGQAQ 240
241 QM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [486-676] |
1 11 21 31 41 51
| | | | | |
1 QIPWFWQNAA GLQPFGSNQI ILRNQPDGTQ GMFIQQQPAT QTLQTQQNQI IQCNVTQTPT 60
61 KARTQLDALA PKQQQQQQQV GTTNQTQQQQ LAVATAQLQQ QQQQLTAAAL QRPGAPVMPH 120
121 NGTQVRPASS VSTQTAQNQS LLKAKMRNKQ QPVRPALATL KTEIGQVAGQ NKVVGHLTTV 180
181 QQQQQATNLQ Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [677-889] |
1 11 21 31 41 51
| | | | | |
1 VVNAAGNKMV VMSTTGTPIT LQNGQTLHAA TAAGVDKQQQ QLQLFQKQHI LQQQMLQQQI 60
61 AAIQMQQQQA AVQAQQQQQQ QVSQQQQVNA QQQQAVAQQQ QAVAQAQQQQ REQQQQVAQA 120
121 QAQHQQALAN ATQQILQVAP NQFITSHQQQ QQQQLHNQLI QQQLQQQAQA QVQAQVQAQA 180
181 QQQQQQREQQ QNIIQQIVVQ QSTGATSQQQ QQQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [890-1101] |
1 11 21 31 41 51
| | | | | |
1 PQQQSGQLQL SSVPFSVSPS MTAEDIAGIT SSALQEALSV SGAIFQTTKP ITCSSSTLPT 60
61 SSVVTITSQS STPLVTSSTV ASMQQAQTQG TQIHQHQQLI SATIAGGSQQ QQQQQQLGLP 120
121 SLTPTTPSPT TNPILAMTSM MNATVGHLST APPVSVSSTA VTPSSGQLVT LSSASSGGGA 180
181 GFPATPTKET PSKGPTATLV PIDSPKTPVS GK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1102-1215] |
1 11 21 31 41 51
| | | | | |
1 DTCTTPKSST PATVSASVEA SSSTGEALSN GDASDRSSTP SKGATTPTSK QSNAAVQPPS 60
61 STIPNSVSGK EEPKLTTCGS LTSATSTSTT TTITNGIGVA RTTASTAVST ASTT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1216-1303] |
1 11 21 31 41 51
| | | | | |
1 TTSSGTFTTS CTSTTTTTTS SISNGSKDLP KAMIKPNVLT HVIDGFIIQE ANEPFPVTRQ 60
61 RYADKDVSDE PPKKKATMQE DIKLSGIA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1304-1450] |
1 11 21 31 41 51
| | | | | |
1 SAPGSDMVAC EQCGKMEHKA KLKRKRYCSP GCSRQAKNGI GGVGSGETNG LGTGGIVGVD 60
61 AMALVDRLDE AMAEEKMQTE SYQTVSDALP IQAATPEVPP ISMPVLAAMS TSSPLSLPLT 120
121 LPLPIAIAPT VSLPVVSAGV VAPVLAI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1451-1537] |
1 11 21 31 41 51
| | | | | |
1 PSSNINGSDR PPISSWSVEE VSNFIRELPG CQDYVDDFIQ QEIDGQALLL LKENHLVNAM 60
61 GMKLGPALKI VAKVESIKEV PPGDVKD
|
| Detection Method: | |
| Confidence: | 27.154902 |
| Match: | 1pk1A |
| Description: | Hetero SAM domain structure of Ph and Scm. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.633600780660145 | bayes_pls_golite062009 |
| protein binding | 0.29861856894481 | bayes_pls_golite062009 |
