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View Structure Prediction Details

Protein: CG4199-PD, CG419...
Organism: Drosophila melanogaster
Length: 593 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4199-PD, CG419....

Description E-value Query
Range
Subject
Range
gi|7511903, gi|4... - pir||T13744 hypothetical protein 22E5.5 - fruit fly (Drosophila melanogaster), gi|45551208|ref|NP_7...
379.0 [0..1] [593..73]

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Predicted Domain #1
Region A:
Residues: [1-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVNCKEYK TTGSTPKKEK STGGAVGSYQ SKCSNQSPST TMSTEESSPD SEYTSAVPVD  60
   61 CRVTDLKENE MKQVDFDEDT RVLLVKQNDR LLAVGAKCTH YGAPLQTGAL GLGRVRCPWH 120
  121 GACFNLENGD IEDFPGLDSL PCYRVEVGNE GQVMLRAKRS DLVNNKRLKN MVRRKPDDQR 180
  181 VFIVVGGGPS GAVAVETIRQ EGFTGRLIFV CREDYLPYDR VKISKAMNLE IEQLRFRDEE 240
  241 FYKEYDIELW QGVAAEKLDT AQKELHCSNG YVVKYDKIYL ATGCSAFRPP IPGVNLENVR 300
  301 TVRELADTKA ILASITPESR VVCLGSSFIA LEAAAGLVSK VQSVTVVGRE NVPLKAAFGA 360
  361 EIGQRVLQLF EDNKVVMRME SGIAEIVGNE DGKVSEVVLV DDTRLPCDLL ILGTGSKLNT 420
  421 QFLAKSGVKV NRNGSVDVTD FLESNVPDVY VGGDIANAHI HGLAHDRVNI GHYQLAQYHG 480
  481 RVAAINMCGG VKKLEAVPFF FTLIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 1h7xA
Description: Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.37477730756688 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 3.17769237742078 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 2.66213649027918 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 1.91752931331276 bayes_pls_golite062009
binding 1.75241039340546 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 1.6431755180135 bayes_pls_golite062009
succinate dehydrogenase (ubiquinone) activity 1.56913317166386 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor 1.56913317166386 bayes_pls_golite062009
succinate dehydrogenase activity 1.54010881004951 bayes_pls_golite062009
protein binding 1.40812730845585 bayes_pls_golite062009
catalytic activity 1.13824203225664 bayes_pls_golite062009
thioredoxin-disulfide reductase activity 1.11021120187216 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 0.684108511779641 bayes_pls_golite062009
ion transmembrane transporter activity 0.230666982979064 bayes_pls_golite062009
cation transmembrane transporter activity 0.150449425695127 bayes_pls_golite062009
disulfide oxidoreductase activity 0.0160065137614933 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [506-593]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKGIRYAGHG SYKDVIIDGS MEDFKFVAYF INEADTVTAV ASCGRDPIVA QFAELISQGK  60
   61 CLGRGQIEDP ATREDWTKKL GQPLPQVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.30103
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

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