| Protein: | CG4313-PA |
| Organism: | Drosophila melanogaster |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4313-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
316.0 | [0..117] | [544..21] |
|
Region A: Residues: [1-427] |
1 11 21 31 41 51
| | | | | |
1 MSVYGCGEFS FSTNSAQERA TRLLPNTKCR AMFPPKSGPT PHPISIALPL SDPYATDHMA 60
61 DQDAVLPVPL SDSLDLDVDV DLNLNMNLNL NVDDRRQVLF EGYSDELLTI AWVACIVFII 120
121 VGVPGNLLTI VALSRGRQTR NSTAIFIINL SCSDLLFGCF NLPLAASTFK ERAWTHSDLL 180
181 CRLFPMLRYG LLAVSLLSVS LITINRYIII AHPRQYPRIY QRRYLALMVA GTWITTFSIM 240
241 IPTWRGVWGI FGLDVSIGSC SIMHDRYGRS PKEFLFIAAF MVPCICIVIC YARIFLLVRK 300
301 AAIRAGTAGK TNVSDVTPSS APQHQIQAMA TPKKPEKVTT SSGEANEPIA GRPFVVEENL 360
361 AYIDDNASTD SLPISYSIRR RDQDQQPPPV DANVVLKERE KERDRDQEKV SLGRSQTQLE 420
421 MGKTHGK
|
| Detection Method: |  |
| Confidence: | 45.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [428-572] |
1 11 21 31 41 51
| | | | | |
1 NPITTSLRTT SFTRFSPRKS HYASMGNTSN ASSIYPGRMS AKDRRLLKMI LVIFVWFVIC 60
61 YLPITVAKIW KSATEVHWFN IAGYLLIYLT TCINPLIYVL MSSEYRRAYW NLLRCHGSPD 120
121 TQKQRNQANA KRKHLESNRQ VKATT
|
| Detection Method: | |
| Confidence: | 4.95 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
