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View Structure Prediction Details

Protein: CG4406-PA
Organism: Drosophila melanogaster
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4406-PA.

Description E-value Query
Range
Subject
Range
gi|125983168, gi... - gi|54643663|gb|EAL32406.1| GA18163 [Drosophila pseudoobscura pseudoobscura], gi|125983168|ref|XP_001...
gi|125983168|ref... - GA18163-PA [Drosophila pseudoobscura], GA18163 [Drosophila pseudoobscura pseudoobscura]
gi|195169475, gi... - gi|195169475|ref|XP_002025547.1| GL15131 [Drosophila persimilis], gi|194109026|gb|EDW31069.1| GL1513...
464.0 [0..3] [355..2]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNIMLVKFV VIFALILASC RVEADNTSVL PEGFVDAAQR STHTNNWAVL VDASRFWFNY  60
   61 RHVANVLSIY RSVKRLGIPD SQIILMIADD MACNARNPRP GQVYNNANQH INVYGDDVEV 120
  121 DYRGYEVTVE NFVRLLTGRT QNGTARSKKL LSDAGSNVLI YLTGHGGDGF LKFQDSEEIT 180
  181 SQELADGIQQ MWEKKRYNEL FFMVDTCQAA SLYEKFTSPN VLAVASSLVG EDSLSHHVDP 240
  241 SIGVYMIDRY TYYALEFLEK VQPFSKRTIG EFLQVCPKRV CISTVGVRKD LYPRDPHKVP 300
  301 ITDFFGAIRP TRVSTDRINV TLANEDDFIF DKDKMVTKKP FKIVMESQFP SELFK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.97
Match: 1i4eB
Description: Caspase-8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle