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View Structure Prediction Details

Protein: CG11596-PA
Organism: Drosophila melanogaster
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11596-PA.

Description E-value Query
Range
Subject
Range
CG11596-PC - This gene is referred to in FlyBase by the symbol Dmel\CG11596 (CG11596, FBgn0023522). It is a prote...
674.0 [0..1] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSMDCATFP MHPKMDEQLA RTFVINEEEE EKHIQKVQNA FLYYGPYACQ RLKRSMDYLN  60
   61 SLSGEDQIML AKYRGHLECV RTCIDRNQAV IREILRGRVL YPTDEATGDP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEFDEPPPNV RHGDMDQAQS TLKLIARDWS TEGALEREQS YKPIIDSIVA YFKHSDFELK  60
   61 DIKILVPGAG LGRLTYELAC LGYSCEGNEF SYFMLIASNF VLNLCDNENK YVLYPWVHQY 120
  121 VNNLRREDQV APVRFPDVCP LKNPPKGHFE IAAGDFLEVY KTPNAYNCVA TCFFIDCANN 180
  181 VIDFIRTIYK ILVPGGIWVN LGPLLYHFSD VSGQNSIEPA FEDLCIIMES VGFVIEKSRT 240
  241 GIRTKYAQNP SSMKQSEYQS LFWVCRKPDL FEEQRGKRKA SREPHDLIVR EDSEEEGEQQ 300
  301 PERNETEEKQ QLKPLATANC ETEIKEQPS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1jqdA
Description: Histamine methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 1.0221592961184 bayes_pls_golite062009
catalytic activity 0.403277401956396 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle