YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG14815-PA
Organism: Drosophila melanogaster
Length: 614 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14815-PA.

Description E-value Query
Range
Subject
Range
gi|113475191, gi... - gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101],...
327.0 [0..30] [613..24]

Back

Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQSGIWRSK PILWRIRFCA AIYFIIIRAL CNTVTKPIAS ITADKQLRSI STSNTMSFRP  60
   61 LVEGDCGGVN PLMQLGGQFT RDVAHKDEGY VQRHFERAAR PEDQLINEFL GQVTAPPQSF 120
  121 QMDTLLQEMR DINIHGNPQQ QMHSQQAEQW GQDFARGLAP ALPNKMIHMQ AQQQDLQHAQ 180
  181 EFFDEPLISS QNFRSLPPLR QPLMPIAAGQ QQDPFFDSAM ETIITDHLPQ APQGESLDDW 240
  241 ISDY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [245-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRSTEQKEQT AANFNEKFWE RLQDEWQKLA DENEHPWLSE YNDNMDAYKE YEFAEGNPMS  60
   61 DVENPFEKGK EYLSKGDIPS AVLCFEVAAK KQPERAEVWQ LLGTSQTENE MDPQAIAALK 120
  121 RAYDLQPDNQ QVLMALAACY TNEGLQNNAV RMLCNWLTVH PKYQHLVAAH PELQAEGTSL 180
  181 ASSLIGPSKL RDLQQIYLEA VRQHPSEVDA EVQDALGVLY NLSGEFDKAV DCYQSALQVD 240
  241 PQNAKTWNRL GASLANGSRS VEAVEAYQQA LQLQPGFIRV RYNVGVCCMN LKAYKEAVEH 300
  301 LLTALTMQAH TNAARELPNA AMAATFRGQN QMSESIWSTL KMVISLMGRS DLQSYVSDRN 360
  361 LAALNEAFKD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1fchA
Description: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peroxisome targeting sequence binding 6.28836842401449 bayes_pls_golite062009
peroxisome matrix targeting signal-1 binding 5.30441166392789 bayes_pls_golite062009
binding 2.09193012129784 bayes_pls_golite062009
protein binding 1.52807685989528 bayes_pls_golite062009
signal sequence binding 1.13935627118933 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle