YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0303433, a6-...
Organism:	Drosophila melanogaster
Length:	409 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303433, a6-....

Description	E-value	Query Range	Subject Range
gi\|125983314, gi... - gi\|54643737\|gb\|EAL32480.1\| GA17676-PA [Drosophila pseudoobscura], gi\|125983314\|ref\|XP_001355422.1\| G...	500.0	[0..1]	[302..1]

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Predicted Domain #1

Region A:
Residues: [1-316]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKHSEPFY ISPRLFDNRR LKRRRCRWME RLLEHQRICM ARMRDQVALA SKTDRQLSHL  60
   61 QRRHVASTLQ PDVTIDLLSD DDETPSAGQP AAAGHNRLLI PAPGHRAHRT GRRQAPRRAA 120
  121 THSYPVTDSI LITSDDEHNE QEPSSTARVR SQLSMRSPPP LAPLTQSETI EEVTVSLVPR 180
  181 TSTTANCLTR VSGHPKPCRA STAASNGFAT AEGGEGGNET GCFLEVDVGG GITATLPDET 240
  241 TVHTVIANRI YELSLSKLRE GLAFSGVPEY TNDLMPEQLQ KLSPALRAKV APLVAPSPPT 300
  301 PISLKLSSDL SISLIS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [317-409]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEDDCESTGP HVNGGVGTEP VHPVVVAAAE AHAAAKLLKQ QQPQLSVVQH LQYVGGGLAA  60
   61 PVALALPVMA ANPTSSASVV ALPLQLPRRR KLG