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View Structure Prediction Details

Protein: FBpp0308652, CG1...
Organism: Drosophila melanogaster
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308652, CG1....

Description E-value Query
Range
Subject
Range
gi|7511922, gi|4... - pir||T13595 hypothetical protein 80H7.10 - fruit fly (Drosophila melanogaster), gi|4691237|emb|CAB4...
214.0 [0..1] [196..1]
gi|115453925, gi... - gi|50901268|ref|XP_463067.1| putative peroxisomal membrane protein [Oryza sativa (japonica cultivar-...
205.0 [0..13] [190..167]
gi|12324641, gi|... - gi|30695366|ref|NP_564615.3| peroxisomal membrane protein-related [Arabidopsis thaliana], pir||H9656...
204.0 [0..15] [188..172]
MPV17_RAT - Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
191.0 [0..10] [183..1]
MPV17 - MpV17 mitochondrial inner membrane protein
gi|123997607, gi... - gi|123997607|gb|ABM86405.1| MpV17 mitochondrial inner membrane protein [synthetic construct], gi|123...
189.0 [0..10] [183..1]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPAAVKLLQ ASLGQWRRGS KLHPMAKGAL TYAVMWPAGS LIQQAMEGRK LREYDWARAL  60
   61 RFSLFGALY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAPTLYGWVR LTSAMWPQTN LRTGIVKAIT EQLSYGPFAC VSFFMGMSLL ELKTFSQAVE  60
   61 ETKEKAAPTY KVGVCIWPIL QTINFSLVPE HNRVVFVSIC SLMWTIFLAY MKTHHEEQSN 120
  121 SAVLPCT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.69897
Match: PF04117.3
Description: No description for PF04117.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle