YRC Public Data Repository - Protein Structure Prediction

Protein:	png-PA
Organism:	Drosophila melanogaster
Length:	291 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for png-PA.

Description	E-value	Query Range	Subject Range
gi\|7269165, gi\|7... - pir\|\|T04835 probable serine/threonine-specific protein kinase (EC 2.7.1.-) F21P8.70 - Arabidopsis th...	339.0	[0..1]	[291..305]
gi\|113611888, gi... - gi\|115473507\|ref\|NP_001060352.1\| Os07g0628700 [Oryza sativa (japonica cultivar-group)], gi\|113611888...	335.0	[0..1]	[291..338]
gi\|4530126 - gi\|4530126\|gb\|AAD21872.1\| receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris]	334.0	[0..1]	[291..332]

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Predicted Domain #1

Region A:
Residues: [1-291]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELGDSKLRA VRVLGQGTFG RVFLCHQNEV RGQPERKVCV KRIIVRNPKT ELGLIKEEVY  60
   61 IISQLRHPHI VEFLRSFSHA GTVNIVMEYV PNGTLRDVIQ QLPSGTGGVN QERLMGYFRD 120
  121 MVVGLEYLHI RCVIHRDIKP ENMLLDANDR VKIADFGIAN VHAPSTQLQA GMGTPMYMAP 180
  181 EAMSSQGKVD FKSDVWSLGL VLYELCLGRS PFAAFLDKNA TPALLHTVVQ ALVRPRLDCQ 240
  241 LIRRLYDPVW AQVCELMVVY EQERRICLPD IFHLDAGMTV TLYKHYFSYS Y

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	74.522879
Match:	2fh9A
Description:	No description for 2fh9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits