YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0300913, CG3...
Organism: Drosophila melanogaster
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0300913, CG3....

Description E-value Query
Range
Subject
Range
FBpp0307920 - type=protein; loc=X:complement(1115493..1115628,1116518..1117045,1117121..1117393,1117469..1117587,1...
507.0 [0..1] [639..1]

Back

Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQPSILVKI LHSIPHVNYT FRRVNDTFNP DSDVYLESLV ILASIPAGLL IGSLLGLLLY  60
   61 LLTRCCDRRQ RKPSAQRCQS CSLVIITLMT CAAIGLGLYG NDDFHNGLLQ AFGSGKSVEG 120
  121 LVLTLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQTESIKHDL ETRMAGHKVE QLVEKPHYNQ TVVMLLIETS RLVTENTSRA VASLDSMVHY  60
   61 FMKAKGSEND TSLMGLLQLG EFYESIRWPA TLAFLTVLLL LCTVLVIGVA RRSRCTLIFF 120
  121 SVSGLFCIII CWLLAGVYLA SSVAAGDFCM RPHDYMCRQV GMRSPYVDFL NCGTPRNRFI 180
  181 LRLNESRDLV DRARESVEHM QRMSQETYPH IDIQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [342-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLNAMDNDLE ITLRNLTTLS ATLDRRTIDM HYEEALRGLC GGGLLGLSLM MVAGLLTSFL  60
   61 LTILVYADSH AWIYLTKRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [421-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLDADKSETA PLFPASNAPS ASISPTAPLS TGTINRTLLH HQQASSGGGS GTLPGSGGGA  60
   61 GAGGGVGANG HNGVGPYRNG SAGLRQGLAS PSSQSSHTSS TATYNNGTTS YHNSHQQHNN 120
  121 HLYSNHYSHS NNHYNNTQHR TNPAAGAVAA AVGVVSSGQR SPSPPPVYDL VHGTRSGHHT 180
  181 LGRLPSHHQQ SATYLPGPNN GKYATLSKQC KTLESNDFY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle