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View Structure Prediction Details

Protein: CG13359-PA
Organism: Drosophila melanogaster
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13359-PA.

Description E-value Query
Range
Subject
Range
gi|7494117, gi|1... - pir||T30296 R27-2 protein - Trypanosoma cruzi, gi|1256742|gb|AAA96494.1| R27-2 protein [Trypanosoma...
208.0 [0..4] [492..202]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCSASFNAL CDVGTPRPNL QRLIPYVEPQ QDDEEDMVVW CRSNLDLACS LSEMRIRCPE  60
   61 HFDVATVVGV NSHTGKLITH FNHRKLGDVD L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APHALLSRRD KFMDICQKQV MTSQGCLASE GTPIPADLEV TWQSHSIIDC LALRKVRAEM  60
   61 NLADQKAAKN LVDRVEVHHK TLQTEEAERR KLIIDKANSA RNLTIDKANS ARILAIDKAT 120
  121 SARKLTIDNS TSAGTLTIDK ATNARKLTID KGTSARKLTI DKATSARKLT IDKATSARKM 180
  181 TIDKAKSTRN LTIDNATSAR KLTIEKATSA RKMTIDKAKS TRNLTIDNAT SARKLTIEKA 240
  241 TSARRFSRPK RYVSGYISKR KSIGKTESLS RGAYIPDPEL NRAIAKYGVS ASQPFKRQHC 300
  301 LVLEKHPDRT QIPNSRTNTS GCKSDGSSTP IWRSARTGAD QNTQAESSDS FNSSNSFESS 360
  361 SLASDSQENH ELSTAAGLTA AFMRRHMLFH LLARRFRRRY LR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle