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View Structure Prediction Details

Protein: CG5273-PA, CG527...
Organism: Drosophila melanogaster
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5273-PA, CG527....

Description E-value Query
Range
Subject
Range
gi|39579415, gi|... - gi|39579415|emb|CAE56721.1| Hypothetical protein CBG24508 [Caenorhabditis briggsae], gi|187040086|em...
180.0 [0..4] [466..60]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMASSGGACS PFAYVAWALF ALLLTHGGDN VVDARRNQGN QRKTSSSSSS SNYGHVTQPS  60
   61 YNTNGHAAGN SHADVAKLSY PNYNSQPNRP MAAGSSGSPG SAPQPGWNVP QGPPPAYSAS 120
  121 NPAGGARPNM HEPPPAYHAP NYGAAPPNYG AATGSNVHQP QYSGVPAGAT YYPAAG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGSGYSPNIP AGATYYPSAG HVPMGGGYHP AAAPPPGATY YQAGSALPPG ATYYSAPPQQ  60
   61 SSSGLGFGTG LLAGGLGGAL LGHALTPSGG SSSSQPVAAA PAAGQDRIII INNGVPVNAS 120
  121 DGTTVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAAGVAAAPG AVPAAPVPSS NTTQDAQQPA VPMAPMPFNP ETSNMTAPDP AAPPPPGGII  60
   61 CVPTKVNETD PADSTKMIEV EKIACYPAPP PPAASAGEGP APLAPMAADQ PGSQQVQQVQ 120
  121 QAQDVAAPIQ ASVRSHTGGA RALEGLTMRT LLLVLMSGVV AKRLAGF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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