YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Suv4-20-PA, FBpp...
Organism: Drosophila melanogaster
Length: 1300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Suv4-20-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|7511886, gi|4... - pir||T13389 hypothetical protein 115C2.10 - fruit fly (Drosophila melanogaster), gi|4688662|emb|CAA...
567.0 [0..1] [1227..1]

Back

Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVGSNHTRR GETGSRFTNS SSSSSTSGGP TASASSTTSV TSSLATNSTS TSTAAALLSS  60
   61 MSHKSHGPPP SAPPSAHHQT NQQHHQVAHS QPHATHYQQT NQHPSHHHQS HQSSNGSGGG 120
  121 SAGSGSGSGS VVSGLNGCNG SAVSRLSQST GMSPRELSEN DDLATSLILD PHLGFQTHKM 180
  181 NIRFRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKVDTQQLKA IVDDFIHTQN YDIAIQRIYE GPWIPRHLKN KNKIATKRLH DHIVRYLRVF  60
   61 DKDSGFAIEA CYRYTLEEQR GAKISSTKRW SKNDKIECLV GCIAELTEAE EAALLHSGKN 120
  121 DFSVMYSCRK NCAQLWLGPA AYINHDCRAN CKFLATGRDT ACVKVLRDIE VGEEITCFYG 180
  181 EDFFGDSNRY CECETCERRG TGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 2igqA
Description: No description for 2igqA was found.

Predicted Domain #3
Region A:
Residues: [390-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAGKDDGLML GLSMGLGLAS SGPGNNGGYR LRETDNRINR IKSRANSTNS TSNSNSNTND  60
   61 STGPSE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [456-621]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSSTNGLVAS GGAGGATGAA MLPTPSQQST GGKEATAAVS LLEKKLPNVV VSPLTMKELR  60
   61 QKGMTKYDAE MIMANAAYQQ QHHHQHHFHH HHHHHHHHHN HGQHASTGAE ATAAVQQMAA 120
  121 MQKPGVGGTG AAGNAGATTV SSVAAGAGSE VNGGRSTSLR KSMRVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [622-775]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSSSISTAS ADEVIAPVVA ASISLPSKAP VVLMPRCKPA QMAIAALHQS QQRQLRRSER  60
   61 QKEKLTDGES SDTSSEQQKK EQKQQDHQLP QKMFSLAEEP QPEKSEEKQQ EQQKRVTRNS 120
  121 AGRVGLVARL ATAHNNNIAT TTNSSSSSNK ATTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [776-1018]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNCNNHNSNN SSRINHNSNL SSRLSVKSRK PAPSEASSIP SSTSSENQQQ QATRRSCSPT  60
   61 PAYKKNLLAS FDPDPPSTQG IKEQLKDESV TYSPVKQKRS RRAAALAAAQ SIHCEALGGF 120
  121 PTGSTGSQRK RAQAGEPTTS CSSTTISNVE PLLKTPERRL KLTLRMKRSP ILDEVIELGT 180
  181 SLSNGGAGRG APGSHREGTA GEGSVRSALN LTGSSSNGIE YEILRMEGIS EHGNDDDEDE 240
  241 EED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1019-1059]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEEPAAEEEE EPPPKEELQL VNKKQRKKQR SRSRSSQRRS P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1060-1187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APSSVYGTPQ KKRLRLIFGN ESHTIDIPPA AAEGSGSGLD DLNSSGGGGD ESFNASYASS  60
   61 TSLTVNTSSS STSSSSGVGG ATSTSAEPVD SSTVGPPIAA QSPSSTTSSS FQSACTSTTN 120
  121 SNSYFPNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1188-1300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQRAAGEDSY AMHYYQLGKF AGTPSPGQGQ AIVSSSSGSS GGGGSGAGFL SMPKHTFGTC  60
   61 ALLAPTSFAC LQNQPQISQQ KTSSGGGAGV VPTSTSTGAV TSHHHTNNHH GQK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle