| Protein: | l(1)1Bi-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1133 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)1Bi-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
994.0 | [0..1] | [1133..1] |
|
Region A: Residues: [1-898] |
1 11 21 31 41 51
| | | | | |
1 MKSKVDKPVT NGAPNATKTK AKEDRKRAKT QKSEADSQIP AKILKKSKKE KPAETEEKEN 60
61 TASNANLKVS QINKAVFVVF KKMQGSQLTK KMINSLITLL RDDTNAEQRT ATTGYVLKRL 120
121 IRSTGADDMK TVSLAASYIH CILNAVPAID AFEVLETLKR DLAVGSQQRG KEDSLAAVGQ 180
181 LVTAFCILQT PQFAKAEPKL VTAVFQILAA QLKGREYLVS LCGDILAVSF KQLPAAIFEE 240
241 YVWPLLQPEL NKPLSGLKVN TCDVLLAVHL TFSSVLGREN ILASLWPKKP VYTQLFDLYF 300
301 SGSTIHSDGV YARLASFLVN GGKDMLAAWQ QYIDSKQPLK LNAAKACAIQ VLSHVLLNFK 360
361 PREEQLILDI FTPTCVQFLL HECSSVKWDK GEGKKPSLKK LKEICFKFEG SLVLCYEKQF 420
421 QNDDNKLHLL LKLLEHTLQL DSVISLPRFC QKLINQLSVE SLHKLYDYYN NKLYSLEDED 480
481 RVSRVHCLNQ MQLILNHSKL SQTAKWRQKQ LNYLLLAGLF HLDASKKPCE AAQASAFSRQ 540
541 CAARCEEIFL GSLLHKCSGL PGLCQLLQKT LSYLNKELGQ PDAESKLRSP RDESLQKAWK 600
601 QVEKLLERPS KESDVVGQSF EALILFVSLA LCTKIPPSIT VLEDLIICRK NALQKSKEQV 660
661 NEELKWQDVL TDALLQLLLQ TGHFWREFVQ LVATALIPHL EHGNLEQVLE VLNMNKNPLS 720
721 KKSDGEEESD DELDKEESLK DSSDDSEDED EDEEEDEGED DAESHLAQIR ESVRQALVND 780
781 GDADDDGASS VDWNDVDEEQ GERLNAALER SFQMFRPKSR KAQEKERPTK SERIDSTNLL 840
841 HFRIRALDLL ELFITKKPTQ SVILDVLHCV FQVYSHCAAD SKLQSLREAS LKLLKKIL
|
| Detection Method: |  |
| Confidence: | 1.03 |
| Match: | 1n52A |
| Description: | CBP80, 80KDa nuclear cap-binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [899-1133] |
1 11 21 31 41 51
| | | | | |
1 ARNIELKENQ STAPILEAIE QLMSSGEEHS EEDQENGKQP ASRQAKRDII IWRDRCFAYL 60
61 VSQASADGEP KKSAVWPLLV EFLELWVAKR RSRLSLASFE ALFQSGQWQG VAPLAVVLAS 120
121 HLDVQKTRSF RRAQILKLLS EQGRRLEVAF KDNNSSSKKF EKQIARYVNQ LETKASSSKE 180
181 LNLLLKILAQ GGEKWQKLRE QIQLVAKDLQ PNKKVAKQKK QAAAKPMVVE DEEST
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
