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View Structure Prediction Details

Protein: Or1a-PA
Organism: Drosophila melanogaster
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or1a-PA.

Description E-value Query
Range
Subject
Range
Or22c-PA - The gene Odorant receptor 22c is referred to in FlyBase by the symbol Dmel\Or22c (CG15377, FBgn00263...
198.0 [0..9] [385..11]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLIEVFLG NLWTQRFTFA RMGLDLQPDK KGNVLRSPLL YCIMCLTTSF ELCTVCAFMV  60
   61 QNRNQIVLCS EALMHGLQMV SSLLKMAIFL AKSHDLVDLI QQIQSPFTEE DLVGTEWRSQ 120
  121 NQRGQLMAAI YFMMCAGTSV SFLLMPVALT MLKYHSTGEF APVSSFRVLL PYDVTQPHVY 180
  181 AMDCCLMVFV LSFFCC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STTGVDTLYG WCALGVSLQY RRLGQQLKRI PSCFNPSRSD FGLSGIFVEH ARLLKIVQHF  60
   61 NYSFMEIAFV EVVIICGLYC SVICQYIMPH TNQNFAFLGF FSLVVTTQLC IYLFGAEQVR 120
  121 LEAERFSRLL YEVIPWQNLP PKHRKLFLFP IERAQRETVL GAYFFELGRP LLVWIFRTAG 180
  181 SFTTLMNALY AKYETH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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