YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG13377-PA, FBpp...
Organism: Drosophila melanogaster
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13377-PA, FBpp....

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
265.0 [0..42] [304..2]

Back

Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMTMLVLG FQLLALFSIA GALLIYLICK VREDSASANA DSHPSRVVLI TSADTALGLQ  60
   61 LCTHLANKGY RVFAGMKEAQ DSLPAKLLCG WMKIREYSEE PIAGTIIPMR LDVTREDVLR 120
  121 EATVIIGANL NADERGIAAV INTSGSVFRG QVESQNVQQW EHMLRTNILG TLRVAKAFVC 180
  181 FLRPTRGRLL YLGGVSGGGN ARNEGDGLVA FNASRVAVDK CAEELRKELH PYGVSVVALD 240
  241 TCGMTAESLY KAPVAQTMSL VVGAPTQYTA DVLSPDALHV IERALWDYVP QQRYALLSHN 300
  301 KYQFALPCRS SLRLQRPVAS TVGESASQSV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.0
Match: 1vl8A
Description: Crystal structure of Gluconate 5-dehydrogenase (TM0441) from Thermotoga maritima at 2.07 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.16785883389468 bayes_pls_golite062009
oxidoreductase activity 1.13814306448308 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle