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View Structure Prediction Details

Protein: CG3038-PB
Organism: Drosophila melanogaster
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3038-PB.

Description E-value Query
Range
Subject
Range
gi|220943052 - gi|220943052|gb|ACL84069.1| CG3038-PA [synthetic construct]
CG3038-PA - This gene is referred to in FlyBase by the symbol Dmel\CG3038 (CG3038, FBgn0040373). It is a protein...
309.0 [0..2] [358..32]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSQSRKNG FLLHLPLETK RNPSNPNTPL SNLLNLTDFH YLLASNVCRK AKRELLAVLI  60
   61 VTSYAGHDAL RSAHRQAIPQ SKLEEMGLRR VFLLAALPSR EHFISQDQLA SEQNRFGDLL 120
  121 QGNFIEDYRN LSYKHVMGLK WVSEECKKQA KFIIKLDDDI IYDVFHLRRY LETLEVREPG 180
  181 LATSSTLLSG YVLDAKPPIR LRANKWYVSK KEYPQALYPA YLSGWLYVTN VPTAERIVAE 240
  241 AERMSFFWID DTWLTGVVRT RLGIPLERHN DWFSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.39794
Match: 2j0aA
Description: No description for 2j0aA was found.

Predicted Domain #2
Region A:
Residues: [276-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAEFIDCCVR DLKKHNYECE YSVGPNGGDD RLLVEFLHNV EKCYFDECVK RPVGKSLKET  60
   61 CLAAAKSRPP KHGFPEIKAL RLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle