| Protein: | FBpp0311392, cal... |
| Organism: | Drosophila melanogaster |
| Length: | 978 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311392, cal....
| Description | E-value | Query Range |
Subject Range |
|
|
661.0 | [0..29] | [975..295] |
|
Region A: Residues: [1-507] |
1 11 21 31 41 51
| | | | | |
1 MTFHKTFGYG CIVLICFELL FAGVETSSEN DDEYLTQKEI ILEKSYHGLI RENETLVEIT 60
61 PLIKVNEEKI CNFHILKKPY HEIPFKIELV NNLGILKARR TLNCENRKSY HFEICAIYCD 120
121 GTPSNTANVH ITVIDVNEYA PTFLEPSYVI EVDEGRLYNE ILRVEASDKD CTPLFGDVCK 180
181 YEILNNDEPF SIDNEGSIKN TEPLSHKASH NHILSVVAYD CAMKESAPIM VSIKVRRVCE 240
241 TKFVGMPERI DYTSGSTESL QLFPNARLDL CDISCKNEED LRIHSSIALK TKHISFGCDR 300
301 DISNCTSGQK VKDLLPHGAE WTKELSYDEG LEPIFHFDGS TGVVVPATVI DHYDFSSQPF 360
361 SILTLFRHNS QVEINKHVKE HIVCSADDHK MNRHHMALFV RNCRLIFLLR KNFNEGDLNI 420
421 FSPAEWRWKI PEVCDNEWHH YVLNVEDSSK VDLFIDGVRF ENSIENRHSN PEVIDDWPLH 480
481 AAHGVNTSLA IGACYQSLEN RLKHGFN
|
| Detection Method: |  |
| Confidence: | 60.69897 |
| Match: | 1q55A |
| Description: | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [508-659] |
1 11 21 31 41 51
| | | | | |
1 GDISEVKVSL NSVLTAEDIK CGTTCAEHLL APKPLQSNNE KSYSDNSQIK ENIEMNEIYI 60
61 SAKNKHDIEQ FMRKVQYINT KQKPTVGRRN IEVLTTLNCK NESSLRLPPI ETYIMVNEPI 120
121 APLGIDIDVV SASLETSDLT PPSYSPKIAI SG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [660-889] |
1 11 21 31 41 51
| | | | | |
1 TSNKLVSYQE IKLGVHILEK TCIDSVSKNN GKLEEKNHID SCSVVVFPSL NPDHEDIKID 60
61 GDESLSSSMD IKTNINKDGV EMIGKDTISN YINVLRSLVY SNKKPAYYLN RVFKLSCAQQ 120
121 SSQYKSGEYT LTLTVLHPKQ TLFKSTNVLP SSLSKVNFIG NTDNETSFHR NSGSVNGNDN 180
181 NQPTESKVYS YSLLHTNNVQ EPKSHIHSFI HKAEGSHVTM LIILVSVFLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [890-978] |
1 11 21 31 41 51
| | | | | |
1 VLLCGVSIAR LKNNQKYIEH HQPCPKISDD GLIWDDSALT ITINPMQADV TSDASSESEN 60
61 SESEDEEALK DGFTHINQLE WDNSNIFQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
