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View Structure Prediction Details

Protein: Zyx102EF-PA
Organism: Drosophila melanogaster
Length: 564 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Zyx102EF-PA.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
565.0 [0..92] [563..2386]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVAQQLRE LSLPKGDTGS PLVCIGHGKV AKLVAKISNN QNASVKRRLD IPPKPPIKYN  60
   61 EMPQVPSSRQ VLCSREPLYS QPLIGVEKTM RGHMPFRKYL SSEFGVADTQ INRKTTLDNP 120
  121 AILEQQLEAL AYHKLQMEKK GLLGVQAKPT QPLNSFTKPL SKTLSKSLIY SNLGSVRKEI 180
  181 ETLELLTDET KI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SASTYSNVNE TDNEKDELPP PPSPESAVSS SYSELRHATL EFNKPIDYLQ NNQTTNPLQI  60
   61 YANQYAMQHD ATGKSSSTYD SIYEPINPRP CVADTLPRES YNLHNSYVND NNPNISHEYN 120
  121 ISNSIEANQT LYIHGNARTT FY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1meyC
Description: Designed zinc finger protein
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [335-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVNSIHRNDK EGLKNYISIP TEPVQELENY GRCVKCNSRV LGESSGCTAM DQIYHIFCFT  60
   61 CTDCQINLQG KPFYALDGKP YCEYDYLQTL EKCSVCMEPI LERILRATGK PYHPQCFTCV 120
  121 VCGKSLDGLL FTVDATNQNY CITDFHKKFA PRCCVCKQPI MPDPGQEETI RVVALDRSFH 180
  181 LECYKCEDCG LLLSSEAEGR GCYPLDDHVL CKSCNAKRVQ ALTNRMTSEH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle