| Protein: | CG9935-PA |
| Organism: | Drosophila melanogaster |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9935-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..6] | [668..19] |
|
Region A: Residues: [1-419] |
1 11 21 31 41 51
| | | | | |
1 MLIASGFLLF QFLSYGLGVP PLVRIGAIFS NQPGMYNSEL AFRYAIHRLN MDKSLLPETT 60
61 VDYYVEYVNR FDSFETVQKV CKLIRVGVQA VFSPTDSVLA THINSICDAL DIPNIGRSAH 120
121 DFSINVYPSK QLVNYAFNDV IQYLNWTRFG ILHEKENGII NLHQLSRSFH GEVHMRQVSR 180
181 DSYVSALNEF KGKEIHNIII DTNSNGISIL LKNILQQQMN EYKYHYLFTS FDLETYDLED 240
241 FKYNFVNITS FRLVDTADVG VKQILKDIGL YSHHIFKKPY LNLHIKKSTI LESEPALMFD 300
301 SVYVFAIGLQ TLEQSHSLTL LNISCEEENS WDGGLSLINY LNAVEWKGLT GPIQFKDGQR 360
361 VQFKLDLIKL KQHSIVKVGE WTPHGHLNIT EPSMFFDAGS MNVTLVVITI LETPYVMMH
|
| Detection Method: |  |
| Confidence: | 6.21 |
| Match: | 2e4zA |
| Description: | No description for 2e4zA was found. |
|
Region A: Residues: [420-554] |
1 11 21 31 41 51
| | | | | |
1 YGKNFTGNER FYGFCVDILE TISREVGFDY ILDLVPDRKY GAKDPETGEW NGMVAQLMKY 60
61 KADLAVGSMT ITYARESVID FTKPFMNLGI SILFKVPTSE PTRLFSFMNP LAIEIWIYVL 120
121 IAYFLVSLCI YIVGK
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [555-669] |
1 11 21 31 41 51
| | | | | |
1 LSPIEWKCIN ACDLENISIG NQFSLTDSFW FTIGTFMQQS PDIYPRAMST RIISSTWGFF 60
61 SLIIVASYTA NLAAFLTTER MINPIENAED LASQTEISYG TLDSGSTMTF FRVCN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
