YRC Public Data Repository - Protein Structure Prediction

Protein:	Crk-PA, Crk-PC
Organism:	Drosophila melanogaster
Length:	271 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Crk-PA, Crk-PC.

Description	E-value	Query Range	Subject Range
gi\|91076140 - gi\|91076140\|ref\|XP_970221.1\| PREDICTED: similar to Adapter molecule Crk [Tribolium castaneum]	127.0	[0..2]	[262..3]
gi\|126002505, gi... - gi\|54640003\|gb\|EAL29244.1\| GA13993-PA [Drosophila pseudoobscura], gi\|126002505\|ref\|XP_001352365.1\| G...	126.0	[0..1]	[262..1]
gi\|220942820 - gi\|220942820\|gb\|ACL83953.1\| Crk-PB [synthetic construct] Crk-PB - The gene Crk is referred to in FlyBase by the symbol Dmel\Crk (CG1587, FBgn0024811). It is a protein...	124.0	[0..1]	[271..1]
gi\|58379961, gi\|... - gi\|58379961\|ref\|XP_310196.2\| ENSANGP00000010943 [Anopheles gambiae str. PEST], gi\|55244083\|gb\|EAA059...	124.0	[0..1]	[260..1]
gi\|157113572, gi... - gi\|157113572\|ref\|XP_001652002.1\| crk [Aedes aegypti], gi\|108877648\|gb\|EAT41873.1\| crk [Aedes aegypti...	123.0	[0..1]	[261..1]
gi\|76643573 - gi\|76643573\|ref\|XP_590426.2\| PREDICTED: similar to v-crk sarcoma virus CT10 oncogene homolog isoform...	116.0	[0..3]	[268..4]
gi\|54606867, gi\|... - gi\|89267841\|emb\|CAJ83370.1\| v-crk sarcoma virus CT10 oncogene homolog (avian) [Xenopus tropicalis], ...	116.0	[0..3]	[268..4]
CRK_RAT - Adapter molecule crk OS=Rattus norvegicus GN=Crk PE=1 SV=1 gi\|1304191 - gi\|1304191\|dbj\|BAA07924.1\| CRK-II [Rattus sp.] gi\|119389392 - gi\|119389392\|pdb\|2EYZ\|A Chain A, Ct10-Regulated Kinase Isoform Ii	114.0	[0..3]	[268..4]
gi\|15126567 - gi\|15126567\|gb\|AAH12216.1\| V-crk sarcoma virus CT10 oncogene homolog (avian) [Mus musculus]	114.0	[0..3]	[268..4]

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Predicted Domain #1

Region A:
Residues: [1-271]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTFDVSDRN SWYFGPMSRQ DATEVLMNER ERGVFLVRDS NSIAGDYVLC VREDTKVSNY  60
   61 IINKVQQQDQ IVYRIGDQSF DNLPKLLTFY TLHYLDTTPL KRPACRRVEK VIGKFDFVGS 120
  121 DQDDLPFQRG EVLTIVRKDE DQWWTARNSS GKIGQIPVPY IQQYDDYMDE DAIDKNEPSI 180
  181 SGSSNVFEST LKRTDLNRKL PAYARVKQSR VPNAYDKTAL KLEIGDIIKV TKTNINGQWE 240
  241 GELNGKNGHF PFTHVEFVDD CDLSKNSTEI C

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.69897
Match:	2eyzA
Description:	No description for 2eyzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits