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View Structure Prediction Details

Protein: CG32000-PF
Organism: Drosophila melanogaster
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG32000-PF.

Description E-value Query
Range
Subject
Range
CG32000-PA, CG32... - This gene is referred to in FlyBase by the symbol Dmel\CG32000 (CG32000, FBgn0052000). It is a prote...
423.0 [0..1] [513..1]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPHNDSKDS KPCIGLLNPD QEDQMKVCGY RRSLMRTGFC WACIFLTGGL LRLVLHWWRH  60
   61 LYLYATCSQC SLEEAEQVLV TEDYQGKHKM YHVKQIQVLT SSNLKTLLEK EQQSIERTHI 120
  121 ECDHVENVLQ LSVHFTSAQF KKCSSIRIFR CKQLVYAWNN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTNRFQRING LDLNIPCSYY HQQRGLPVHE QISRRIVFGD NEITVPLRDF KTLLFLEVLN  60
   61 PFYVFQLFSV ILWFTYDYYY YACVILLMSV FGITVSVLQT KKNQDVLQKT VYNTGNAWVV 120
  121 DHKGLSKELP TRAIVPGDII EIPSSGCTLH CDAILISGNC ILDESMLTGE SVPVTKTPLP 180
  181 SKRDMIFDKT EHARHTLFCG TKVIQTRYIG SKKVLAFVIN TGNITAKGEL IRSILYPPPV 240
  241 DYKFEQDSYK FIQFLAIIAC VGFIYTLVTK ILRGTDPVKI AVESLDLITI VVPPALPAAM 300
  301 TVGRFYAQKR LKTSEIFCIS PRSINVAGSI NCCCFDKILK YSILRERRER AILAVTKKVS 360
  361 A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.221849
Match: 1iwoA
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle