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View Structure Prediction Details

Protein: Smvt-PA
Organism: Drosophila melanogaster
Length: 591 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Smvt-PA.

Description E-value Query
Range
Subject
Range
gi|91084087 - gi|91084087|ref|XP_968449.1| PREDICTED: similar to sodium/solute symporter [Tribolium castaneum]
371.0 [0..22] [569..7]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLLNATVL ATAATVVPDS QFVFNATDYG VFALVLSISA AIGVYFGFFA KGEDTTEEYL  60
   61 MGGKRMKTIP IAISLVASQL SAISIMTIPA EMYAYGINWV FNVVCMVLVV PLLNYLVIPV 120
  121 FYNNNIT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NCYEYLEMRF CRKVRVLQTF IFILTMFFML PIFIFLPSLA FAQVTGFNVH LINTVVCSIC  60
   61 VFYTMFGGIK AVVWTDVIQA AIMVASVVLV GVLGAHRVGG FFEVLRIAGE GGRLDINYNF 120
  121 DLTTRSTIWN IFTSATMMWT GYVGLNQSCV QRIVSLPSLG HARRSLVLFG FGFILIMFFN 180
  181 CFTGIVIYSR FHDCDPIQSG HVSKVDKMVP YFVQDTVGNL WGMPGVFISC VFSAALSTLS 240
  241 ASINSLGGVV YFDYIKPHIR HTEHRANVIM KLFVFFTGIY CILGGMVIEN FNSILQVIYS 300
  301 IGGMSFGSTC GVFMLGML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [446-591]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPKSHGRAAL VGVLASIACM ATIVILSWGR NHYDTLPTST SACPASLNGT IKDISTASPL  60
   61 FLGSTTEAPV GEKEFSILDL SFNWYTVTGF VITWLIGIPL SYILKSGPDY KPNPKLLSPV 120
  121 VQPFVHYKLT PSDEPHQLNL EKPEKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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