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View Structure Prediction Details

Protein: bnk-PA
Organism: Drosophila melanogaster
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bnk-PA.

Description E-value Query
Range
Subject
Range
gi|393010, gi|539439 - pir||A49072 bottleneck - fruit fly (Drosophila melanogaster), gi|393010|gb|AAC46467.1| Bottleneck
474.0 [0..1] [303..1]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISTFNFQF YNYKLSPSSP GFGSTASRSS SSCISELEMD IDEDMSAQPT ITSTPKPRFT  60
   61 SQLAVELAKT EPGNGISPLR PKLHTAQKRW SMELREKVLE MSKRNNGQEK PQTARQQEQR 120
  121 QPQEQPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQEELQHQQQ EPTVTDKINF FNKLTNTFES GFSKLMPQAS STNNRFIAML RTARPQNVAT  60
   61 TTANSSTANS FLGSDHSLSG SVTGQVPPPK PKRLSATTAQ FATPHVPAMG VGKGGSQRKC 120
  121 SLRRKPSMDK SRATISRQSS SASVRTQNHA IMEDLSLVVP VRLRIAEYEQ RISMSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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