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View Structure Prediction Details

Protein: Gycbeta100B-PA
Organism: Drosophila melanogaster
Length: 787 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gycbeta100B-PA.

Description E-value Query
Range
Subject
Range
gi|861203 - gi|861203|gb|AAA87941.1| soluble guanylyl cyclase beta subunit
592.0 [0..1] [758..1]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGFVNYALE LLVLKHFGEE IWEKIKKKAM VSMEGQFLVR QIYDDEITYN LIGAAVEILN  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.045757
Match: 2o09A
Description: No description for 2o09A was found.

Predicted Domain #2
Region A:
Residues: [61-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPADDILELF GKTFFEFCQD SGYDKILQVL GATPRDFLQN LDALHDHLGT LYPGMRAPSF  60
   61 RCTEKDGELL LHYYSERPGL EHIVIGIVKA VASKLHGVEV EIDIVKRKGE PIDEAEKERA 120
  121 IARENQQLLE DAVATTTTGS ATVVLAPSSD AERNNNHNGS NGSNNNGMAN NGNTVNVNNN 180
  181 NDGQQIASET DPSIALSTCP IAQDSFDCDG DKEQKCLRLL KNKSDDIERY DHVQFLIREI 240
  241 NVAAKSQVDA KKDEVPDDME FLCEAPLISP ATFCKVFPFH LMFDRQMKIV QAGKAVSRVI 300
  301 PRVAEENCSL IEVVEAIRPH LQLNFENILS HINTIYVLQT RQGAMSSRHE QRFLRLKGQM 360
  361 MYIPETDRIL FQCYPSVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.39794
Match: 1qcfA
Description: Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [439-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLDDLTKKGL YISDVPLHDA ARDLVLLSEK FEAEYKLTKN LEMLTDKLQQ TFRDLESEKQ  60
   61 KTDRLLYSVL PKSVANELRH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.045757
Match: 1xjdA
Description: Crystal Structure of PKC-theta complexed with Staurosporine at 2A resolution
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [519-787]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRPVPPKRYD SVTLMFSGIV GFGQYCAANT DPDGAMKIVK MLNELYTVFD ALTDSKRNLN  60
   61 VYKVETVGDK YMAVSGLPDH CEDHAKCMAR VALDMMDMAK NVKMGSNPVQ ITIGIHSGEV 120
  121 VTGVIGNRVP RYCLFGNTVN LTSRTETTGV PGRINVSEET YRLLCMAINQ DDSFHLEYRG 180
  181 PVIMKGKPTP MDCWFLTRAT SSILGGTSST GGSGGGGNGS LDSPLLQPAT PTAGAATPIP 240
  241 VVAQRAAGHA SVSRTSSAGG GGGGAVVGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle