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View Structure Prediction Details

Protein: Ctr1C-PA
Organism: Drosophila melanogaster
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ctr1C-PA.

Description E-value Query
Range
Subject
Range
Ctr1C-PB - The gene Copper transporter 1C is referred to in FlyBase by the symbol Dmel\Ctr1C (CG15551, FBgn0062...
228.0 [0..1] [270..1]
CTR3 - High-affinity copper transporter of the plasma membrane, acts as a trimer; gene is disrupted by a Ty...
CTR3_YEAST - Copper transport protein CTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTR3 PE=1 ...
168.0 [0..52] [259..1]
gi|157767166 - gi|157767166|ref|XP_001667063.1| Hypothetical protein CBG16370 [Caenorhabditis briggsae AF16]
gi|187026529, gi... - gi|39596335|emb|CAE69973.1| Hypothetical protein CBG16370 [Caenorhabditis briggsae], gi|187026529|em...
155.0 [0..6] [261..62]
gi|85112589 - gi|85112589|ref|XP_964373.1| hypothetical protein [Neurospora crassa OR74A]
gi|32409059, gi|... - gi|32409059|ref|XP_325010.1| hypothetical protein [Neurospora crassa], gi|28926152|gb|EAA35137.1| hy...
151.0 [0..38] [263..1]
gi|125772558, gi... - gi|54637315|gb|EAL26717.1| GA13809-PA [Drosophila pseudoobscura], gi|125772558|ref|XP_001357583.1| G...
144.0 [0..56] [270..1]
gi|46101719, gi|... - gi|71023795|ref|XP_762127.1| hypothetical protein UM05980.1 [Ustilago maydis 521], ref|XP_403595.1| ...
143.0 [0..44] [264..3]
gi|58394998, gi|... - gi|58394998|ref|XP_320931.2| ENSANGP00000017579 [Anopheles gambiae str. PEST], gi|55233266|gb|EAA014...
139.0 [0..67] [258..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHHGVDASE GHVHHHASHG SPEPVPPSSG HEGHHSPEMN HHGNHGEHTK HGHHEGGAHD  60
   61 MSMAMFFHTG DSETILFKFW RTESAMALTL SCLLIFMVAV LYEALKFFRE WLFSWDRKRL 120
  121 AGGRDQYNRP RRYREAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNYNQPTYPP RTNQQSGTQV YAYRPRSPSM PPLQPPGRSS PQAQSSLILT QHTHHHVQEN  60
   61 TPPAGRTTKL KVFCSGMHIL QTFLHVLQVL ISFLLMLVFM TFNVWLCVAV LLGAGVGYYI 120
  121 FCAFRTNVQE HCN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle