YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0311975, CG1...
Organism:	Drosophila melanogaster
Length:	290 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311975, CG1....

Description	E-value	Query Range	Subject Range
gi\|21406608 - gi\|21406608\|gb\|AAL48409.2\| AT13467p [Drosophila melanogaster]	185.0	[0..1]	[290..15]
gi\|125772598\|ref... - GA13800-PA [Drosophila pseudoobscura], GA13800 [Drosophila pseudoobscura pseudoobscura] gi\|54637330, gi\|... - gi\|54637330\|gb\|EAL26732.1\| GA13800 [Drosophila pseudoobscura pseudoobscura], gi\|125772598\|ref\|XP_001...	181.0	[0..1]	[290..1]
KAD_METBF - Adenylate kinase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=adk PE=3 SV=1	159.0	[0..88]	[274..1]
KAD_METMA - Adenylate kinase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / ... KAD_METMA - Adenylate kinase OS=Methanosarcina mazei GN=adk PE=3 SV=1	159.0	[0..88]	[274..1]
KAD_CARHZ - Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=a...	158.0	[0..88]	[274..1]
KAD_METAC - Adenylate kinase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=a... KAD_METAC - Adenylate kinase OS=Methanosarcina acetivorans GN=adk PE=3 SV=1	156.0	[0..88]	[274..1]
gi\|83850335, gi\|... - gi\|83856535\|ref\|ZP_00950064.1\| adenylate kinase [Croceibacter atlanticus HTCC2559], gi\|83850335\|gb\|E...	156.0	[0..49]	[275..141]
gi\|52549652 - gi\|52549652\|gb\|AAU83501.1\| adenylate kinase and related kinases [uncultured archaeon GZfos29E12]	156.0	[0..88]	[278..1]
gi\|10946936, gi\|... - gi\|5725312\|emb\|CAB52408.1\| membrane-associated adenylate kinase [Mus musculus], gi\|32449848\|gb\|AAH54...	155.0	[0..85]	[275..22]
gi\|85829651, gi\|... - gi\|86143944\|ref\|ZP_01062312.1\| adenylate kinase [Flavobacterium sp. MED217], gi\|85829651\|gb\|EAQ48114... gi\|85829651, gi\|... - gi\|86143944\|ref\|ZP_01062312.1\| adenylate kinase [Flavobacterium sp. MED217], gi\|85829651\|gb\|EAQ48114...	154.0	[0..1]	[275..127]

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Predicted Domain #1

Region A:
Residues: [1-84]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPTDFDRS MLVEYSAAFM YYIEKHKLME VMSRLLAEIS VADGVTDVRR WMGENITRIG  60
   61 VEIYTKSMDA FHRGVRGDFY QLPR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.045757
Match:	2j37W
Description:	No description for 2j37W was found.

Predicted Domain #2

Region A:
Residues: [85-290]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFYHRIVLHG KPGSGRRSLA YVLAQRWNLL ILDADVLAYH SINKQDQDEP SRLLQEAIEK  60
   61 DCVYKRSQAV GNLIENRLLQ EDALHRGWIL INYPNNKCEA EELFEGFTVP PNRFVFLQID 120
  121 ERLARMRILL NSYSPGPQAH VSFVDRQMAQ FRKSEPALSS YLSQRREVVY VDASPCFEQV 180
  181 KCGIISELTK TPYVLGKKYG EANAKI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.154902
Match:	2c9yA
Description:	Structure of human adenylate kinase 2
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits