YRC Public Data Repository - Protein Structure Prediction

Protein:	CG2246-PG, CG2246-PB
Organism:	Drosophila melanogaster
Length:	387 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2246-PG, CG2246-PB.

Description	E-value	Query Range	Subject Range
gi\|224098594 - gi\|224098594\|ref\|XP_002187809.1\| PREDICTED: similar to phosphoribosyl pyrophosphate synthetase 1 iso... gi\|50745642 - gi\|50745642\|ref\|XP_420181.1\| PREDICTED: hypothetical protein [Gallus gallus] gi\|542151400\|ref... - PREDICTED: ribose-phosphate pyrophosphokinase 1 isoform X2 [Zonotrichia albicollis]	393.0	[0..26]	[385..1]

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Predicted Domain #1

Region A:
Residues: [1-387]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQRNKLGS VRPPKRCRSD MDNTSTSDIV IINGNSHPDL ANMVAERMGI KNGGCSVFHK  60
   61 SNRETIVEIS DSVRGKDIYI IQTGTKDANN NIMELLIMAY ACKTSSARSI VGVIPYLPYS 120
  121 KQCKMRKRGC IVSKLLAKMM CTSGLTHIIT MDLHQKEIQG FFDIPVDNLR ASPFLLQYIQ 180
  181 ESIPDYRNSV IVARNPGVAK KANSYAERLR LGLAVIHGEQ KETDADEVDG RYSPPPTRNS 240
  241 TPQHAPTSSA RQRTTSVSVG VPEHIVKVKP PLTIVGDVSG RIAIMVDDLI DDVQAFVAAA 300
  301 EMLKENGACK IYVLATHGLL SSDAPRQLDE SPIDEIVVTN TIPHEIQKLQ CHKIKTIDIS 360
  361 ILIAEAIRRI HNKESMSYLF RNVTLED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	95.09691
Match:	2ji4A
Description:	No description for 2ji4A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits