| Protein: | tmod-PB |
| Organism: | Drosophila melanogaster |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tmod-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..34] | [393..14] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MESALPVAEF QQIKLRPVPK VKRRAPQPPV SLRLKHKNTS ATTKTTTLTT PAKLYGKDLS 60
61 EYDDVDVESL LAQLSPEEIT ILAKEVDPDD NFLPPDQRNS YECTKEATGP LNRKQLIEHI 120
121 NKQAIETPDQ PEFEPFVQGK VRGKKWVPPP RDARDIEAEE QIAIDMGEEY EHALNDATQE 180
181 EIIDLAAILG FHSMMNQDQY HASLLN
|
| Detection Method: |  |
| Confidence: | 7.744727 |
| Match: | PF03250.5 |
| Description: | No description for PF03250.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-403] |
1 11 21 31 41 51
| | | | | |
1 KGQPVGLGWD GITKSTQQKL FPMDPPNNTD VEESIKRVKD DDSKLIDLNL NNIKNISDEK 60
61 LEQLFAALPQ NEHLEVLSLT NVGLTDKTAL LLAAAIEKSK TLRVLNVETN FISPPVIVKL 120
121 VQALLKCHTI EEFRASNQRS AVLGNKIEME ITDLVEKNSS LLRLGLHLEF NDARHRVAAH 180
181 LQRNIDRIRV KRLNQRK
|
| Detection Method: | |
| Confidence: | 21.522879 |
| Match: | 1io0A |
| Description: | Tropomodulin C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule minus-end binding | 7.70887263207962 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 5.04595324782806 | bayes_pls_golite062009 |
| actin binding | 4.98528043340021 | bayes_pls_golite062009 |
| tropomyosin binding | 2.80631683562112 | bayes_pls_golite062009 |
| binding | 2.665591019824 | bayes_pls_golite062009 |
| protein binding | 2.66138763326419 | bayes_pls_golite062009 |
| myosin binding | 1.32546860780591 | bayes_pls_golite062009 |
| tubulin binding | 1.00494145757097 | bayes_pls_golite062009 |
| microtubule binding | 0.854246295331667 | bayes_pls_golite062009 |
| catalytic activity | 0.143741655309638 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 0.0986232864289136 | bayes_pls_golite062009 |
