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View Structure Prediction Details

Protein: CDase-PA, CDase-...
Organism: Drosophila melanogaster
Length: 704 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDase-PA, CDase-....

Description E-value Query
Range
Subject
Range
gi|60729553, gi|... - gi|60729553|pir||JC7881 ceramidase (EC 3.5.1.23), neutral isoform - fruit fly (Drosophila melanogas...
1048.0 [0..1] [704..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSKMAFLA FLAVSFLCGL VSATYKVGVG RADITGPPVE INFMGYANIK QVGRGIHTRV  60
   61 FARAFVVEDE KGNRVAFVSA DAGMMGYGLK REVIKRLQAR YGNIYHNDNV AISGTHTHGA 120
  121 PGGFLMHLLY DISILGFVPQ TFEVMAQGLY LCIKRATDNL VDGRILLSKT TVLNVNINRS 180
  181 PSSYLRNPAE ERAQY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHDTDKTLTQ LRFVDLENNL LGAFNWYAVH ATSMNNTNRL VTSDNVGYAA LLLEKEYNPN  60
   61 KMPG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [260-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGKFVGAFCS SNLGDVSPNI MGPKCSISGN ECDLLTSRCP TGEGDCFASG PGKDMFESTQ  60
   61 ILGQRLADAA LGLLNEQSQE STAREVTGDV RFIHQFVDMP NYNGSTYNPL SRKVDKIRGC 120
  121 QPAMGYSFAA GTTDGPGAFS FEQGTTTDNP MWNFVRDFIA APTQEDIKCH EPKPILLATG 180
  181 RATFPYEWQP KIVSDQLLKI GDVIIAAVPC EFTTMA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [476-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRRLRNQIRA AASAVGGIDT EVIIAGLTNI YTSYTVTPEE YQAQRYEAAS TIFGPHTHSI  60
   61 YMDVFERLTK AMMRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [551-704]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETVDAGPSPP YMNDVMLSLN TGVLFDGHPI NTDFGYVKSQ PNKEYGINET VKVTYISGNP  60
   61 RNNLFTEKTY FTIERKINED RWKVAYTDAS WETKMVWHRT NTILGFSEMD IYWDISPQTL 120
  121 PGEYRIRHSG EYKYILGGKY PYEGLTHSFT VKED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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