YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mRpS18C-PA
Organism: Drosophila melanogaster
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS18C-PA.

Description E-value Query
Range
Subject
Range
gi|12835208 - gi|12835208|dbj|BAB23188.1| unnamed protein product [Mus musculus]
163.0 [0..5] [130..21]

Back

Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLGKFLAQ NATLVNLVGR QQLGTVSRLY SAAPESSDLD LPIDIKNPYE KDPQQCILCK  60
   61 HSIEPHYKNV KLLSQFQSPY TGRIYGRHIT GLCKRRQEQV EQAILRAQQC LLMPGYHKDL 120
  121 DFLQDPKLFD PERPVRPHKY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1vs5R
Description: No description for 1vs5R was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.70687222528823 bayes_pls_golite062009
structural molecule activity 9.13243988503345 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle