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View Structure Prediction Details

Protein: CG7837-PA
Organism: Drosophila melanogaster
Length: 975 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7837-PA.

Description E-value Query
Range
Subject
Range
gi|54637904, gi|... - gi|54637904|gb|EAL27306.1| GA20620-PA [Drosophila pseudoobscura], gi|125773821|ref|XP_001358169.1| G...
447.0 [0..1] [971..1]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWTPEQVES MLEVLKTSTD RTVIYKCLVK LRTDLVKDKN GIVLFRTAGG VHIMVRLITK  60
   61 LNEKIMEVVL SILGNCCTDE QSCIEAVECK VIHPLVTILK TIPNPLIQCR ACRMLGNIAK 120
  121 SKKASQCLTV HYAAIAPAIC HIIESTSAVQ TRIMAFRVCR FLLASSQFLK YFLMANGFQQ 180
  181 LMRIFLAVMK NEEASKEPVP DIEMSTLIGL KRNQHREKYF EEVARNLEGV RSDIFDHQML 240
  241 KNSTRNCDYA LPKENEAAVE LALEILKCLV LISAQQIGLK VWESISWNTS LASIVCFVKE 300
  301 DGDQRASALK ILSNFCKDPF AFYMLSTADA IVAACEMLMA VNMAKPLSES ESRHCINIIL 360
  361 TLSTDACSRS KIRRCGALRK LVAMIRDSNS QSERSSLFHI LYNFQYDNLS MELMLYEGLM 420
  421 PMLVRELNDY LTSDDEHHKR RRDERLQGGK KRKLTDPTTP ETLSKFSKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.30103
Match: 2gl7A
Description: No description for 2gl7A was found.

Predicted functions:

Term Confidence Notes
binding 0.373576425899935 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [470-659]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HETLGSDFES PSSSPRSYRT TSPCSSRSMS PVCTDLLTND DDDNYSPACS DDDEDEDDST  60
   61 NNSNLDTRER RIAANRSQPS NVLDILKLIE EGSEPIDDPL SDKEDLEELS SDVPPKLAPF 120
  121 RNTTCNTIDI IENLIYRITL MVNKRVELGK PETLDTLIRA IKLFGSNNNF PNALTNILLE 180
  181 SQFFAQIIKH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [660-774]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVVHQLYQFT KLKEIRKDGF AFLETLTNVG ESNYGKEELV RLLRCDDVIS QQRAAISVAY  60
   61 IVKSHRLLYQ FLYDGNALNM LFDMMLRKKT EDHYADEAAD AVTSMARYTL GIVMP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.221849
Match: 2cr2A
Description: Solution structure of N-terminal domain of speckle-type POZ protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.179237686199017 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [775-903]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAEPAESTAG ICNQIANDTA PLHANCDMRF LVGHGADSTS IGFNKQLLCD TSEVFNKMLN  60
   61 SDFREGHQGE IQLPDYTASG LRYFLHLIVC QERHLTEPDY PALLQAYEMA RVYIMPDMEA 120
  121 VLQQRLIQY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.522879
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #5
Region A:
Residues: [904-975]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDSHNCLRLL EWALKNYHAD LTETAISFYL CSALPAQEKL QLFRAAEDST YASEWFQLLN  60
   61 DAVFERCRGY VF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.522879
Match: 2eqxA
Description: No description for 2eqxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle