YRC Public Data Repository - Protein Structure Prediction

Protein:	CG1969-PA
Organism:	Drosophila melanogaster
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1969-PA.

Description	E-value	Query Range	Subject Range
CG1969-PB, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG1969 (CG1969, FBgn0039690). It is a protein...	148.0	[0..6]	[219..2]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	137.0	[0..39]	[195..1]
gi\|54637508, gi\|... - gi\|54637508\|gb\|EAL26910.1\| GA15162-PA [Drosophila pseudoobscura], gi\|125773033\|ref\|XP_001357775.1\| G...	132.0	[0..6]	[219..2]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	131.0	[0..40]	[195..1]
gi\|58391358, gi\|... - gi\|58391358\|ref\|XP_318538.2\| ENSANGP00000019649 [Anopheles gambiae str. PEST], gi\|55236571\|gb\|EAA137...	120.0	[0..6]	[202..1]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	119.0	[0..40]	[197..1]
gi\|152022841, gi... - gi\|89203282\|ref\|ZP_01181966.1\| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus subsp. c...	119.0	[0..40]	[197..13]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	117.0	[0..42]	[192..20]
gi\|148231756, gi... - gi\|33416776\|gb\|AAH55971.1\| MGC68838 protein [Xenopus laevis], gi\|148231756\|ref\|NP_001079834.1\| hypot...	116.0	[0..3]	[189..1]

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Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLTEETYL YDPNLLLKLD FHRSPANFKP FISAANPGEP WMKVRPLKDT DYDRGFLQLL  60
   61 SQLTHVGNVN RTQFLTRFSQ MKASGDYFVT VIEDTRKNEI IGAASLVIER KFIHNCAVRG 120
  121 RLEDVVVNDT YRGKQLGKLI VVTVSLLAEE LGCYKMSLDC KDKLIKFYES LGYVAIPGNS 180
  181 NSMTIRYDEG PTLKRNATSA GSSGTVGDSC QTVSLDFAS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.69897
Match:	2huzA
Description:	No description for 2huzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits