YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Obp99d-PA
Organism: Drosophila melanogaster
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp99d-PA.

Description E-value Query
Range		 Subject
Range
gi|6682279 - gi|6682279|emb|CAB64650.1| male specific serum polypeptide gamma 1 [Ceratitis capitata]
 139.0 [0..14] [130..6]
gi|33328925 - gi|33328925|gb|AAQ09869.1| CG7584 [Drosophila yakuba]
 133.0 [0..14] [130..5]
gi|6634105 - gi|6634105|emb|CAB64378.1| odorant binding protein [Ceratitis rosa]
 131.0 [0..31] [130..2]
Obp99c-PA - The gene Odorant-binding protein 99c is referred to in FlyBase by the symbol Dmel\Obp99c (CG7584, FB...
gi|220947830, gi... - gi|220957134|gb|ACL91110.1| Obp99c-PA [synthetic construct], gi|220947830|gb|ACL86458.1| Obp99c-PA [...
 130.0 [0..14] [130..5]

Back

Predicted Domain #1
Region A:
Residues: [1-137] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHLRLEIIC WSCLLIAMAV STEAASVWKL PTAQMVYEDL EKCRQESQEE DAATLRCLVK  60
   61 KLGLWTDESG YNARRIAKIF AGHNQMEELM LVVEHCNRME QDTSHLDDWA FLAYRCATSG 120
  121 QFGHWVKDFM SQKEVER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 1oohA
Description: Complex of Drosophila odorant binding protein LUSH with butanol
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 5.06322454789787 bayes_pls_golite062009
pheromone binding 3.11551486454066 bayes_pls_golite062009
phenylalkylamine binding 1.62981757488245 bayes_pls_golite062009
binding 1.45023275675327 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle