| Protein: | dmrt99B-PA |
| Organism: | Drosophila melanogaster |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dmrt99B-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
166.0 | [0..55] | [508..123] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MSLPSGVDMQ NLMSQHPVLG ALPPAFFLRA ASERYQRTPK CARCRNHGVV SALKGHKRYC 60
61 RWRDCVCAKC TLIAERQRVM AAQVALRRQQ AQEENEAREL GL
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1lpvA |
| Description: | DM domain of Doublesex (dsx) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.01128232423451 | bayes_pls_golite062009 |
| nucleic acid binding | 0.127098718479447 | bayes_pls_golite062009 |
| DNA binding | 0.0686553590152803 | bayes_pls_golite062009 |
|
Region A: Residues: [103-212] |
1 11 21 31 41 51
| | | | | |
1 LYTSVPGQQN GSDSATPTPH SPNHSGSGGS GSGGSGQNGV FHGGIPSPPS DGFEASSTPN 60
61 HHQQSQQQQQ AHHQQHLSHP HQQSQRFNGN ESDTDGRTRS EHLSVGFSPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [213-405] |
1 11 21 31 41 51
| | | | | |
1 RTELDESPVS KRGAALSNET DQDTGSESGS PSSPRPKVAG LFNLTASLSP ARTGPPSSPE 60
61 SDLDVDSAPD EATPENLSLK KEDSQSPPNT PAENLHLLRS FSSSHAQGFL PYHHTQFLAA 120
121 AGLPAHHHPA AHSPHHQQQQ QQQQQQQNHL PQHHQQQQQQ QQQQQRSPID VLMRVFPNRR 180
181 RSDVEQLMQR FRG
|
| Detection Method: | |
| Confidence: | 0.961 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [406-510] |
1 11 21 31 41 51
| | | | | |
1 DVLQAMECML AGEDLGQTPP QVPPSPPFPM KSAFSPLVPP SVFGSPTHRY HPFMQAHAKR 60
61 FLTAPYAGTG YLPGVLSAAD IEQSESNGAG GIGLDRTSNA GDSQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
