| Protein: | CAP-D2-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1380 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP-D2-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1209.0 | [0..5] | [1380..9] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MEESHDFQFV LPLNASDLIN SSGDQYYVKE IFGAQEIPAK LQECKRKVHL GDPFYIFEHF 60
61 DLYYSIIEAR GSDGASAQNL MRSFDLLYLT VEKLFQDLQP LLTASEPMSN QQRNSYLNLT 120
121 KMTLFLQVST VKKINNSVQQ AMRDQQLNVQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [151-253] |
1 11 21 31 41 51
| | | | | |
1 KKRAKPSEGL EQFPNWEVKR GKFLVQLFNV LQCPLEKLWS PPVAEEDFIN LLCDPCYRTI 60
61 ELLPLRMDNK HVFDTIFQIL GTSIKRFNQA MTFPVRILQI LRG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [254-610] |
1 11 21 31 41 51
| | | | | |
1 TEHAAHSVAA GILLLHEEYG ISSVFSILIK SIVDALRMDS SDSSVSKHFS NFLAEFSNIA 60
61 PSLIVPHLEK LAEDLLDCQS HTLRNCVLQI IGDTVVSELT SEDLSEELKE VRNEFLEHLM 120
121 AHILDISAHV RSKVLSIWHH LKTQHAIPLN FLTRVLEEAI GRLEDKSSLV RRAAMHLIKS 180
181 ALESNPYSSK LSIDELRAKH EHEVQAMEKL NEVLEEERKQ EEKLNDEFSS LAPELLPFIE 240
241 ENLTEFPDMQ FDKEESDETL MERIIPLMRE KNYKDVIVLV RKVDFLAGNQ NMSSLLKHEE 300
301 HCVYVLALLK TYHLLAAGFK QSSEEMLQQI KTVQFLKDSI DFAVLMTSAF PKLHEML
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1uklA |
| Description: | Crystal structure of Importin-beta and SREBP-2 complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [611-730] |
1 11 21 31 41 51
| | | | | |
1 MSKTNTDVFE AVDLFTTGYM FGIHGTESGM QRMLQLVWSS DKEKRDAVSD AYKRVLFSTD 60
61 QTGRAHAIKV VQNLSKFLSE IEYGHYTALE SLMTEWVLGG DIDAAVIQVL FERFTLKLEG 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [731-817] |
1 11 21 31 41 51
| | | | | |
1 TTSNESRLSL QLLIMASQSK SSIVSANTAI IEDIAVGERV RRDPRIFTSC LQLLVNSIDA 60
61 NNTAKYYKRQ NSDAEFVGKI TRLFLDF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [818-977] |
1 11 21 31 41 51
| | | | | |
1 FFHRSLYDFD ALAMSVFEYF YRMCQAPDVI AQQLVTALLK QFNESWLVKE AAAIVPSPDK 60
61 ADTETVPDSQ PLEIPHSQTL TPTQTQADSQ SQMQGTLIPV YLVSRLIFCI GYMTIKEMIF 120
121 LDMDIYNNMK YRDELTALEE RKNRNQQAGS SHNAARLTLN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [978-1380] |
1 11 21 31 41 51
| | | | | |
1 MSAMEVRKRL SGVAAEPQQE PDDDLVGATA EDNIAEEIHG ICEDMLLYNP DALLSKLAPF 60
61 IIEICKRPGE FGDPTLQQAA TLALARLMTV SSRFCESNMS FLMNILNLTK NIRIKCNTVV 120
121 GLSDLTFRFP NIIEPWTGHF YAQLHESNTE LRLTAVKMLS HLILNEMIRV KGQIADMALC 180
181 IVDGNEEIRN ITKQFFKEIA NKSNILYNVL PDIISRLGDI NLNLDEDKYR IIMSYILGLI 240
241 QKDRQIETLV EKLCLRFPVT RVERQWRDIA YCLGLLTYNE RAVKKLMDNM QHYRDKVQVD 300
301 EVYQSFKLII SNTNKLAKPE LKAVVTEFEN RLNECLQVNP DTAAQGDQES TPEGQGNRTR 360
361 AAPRTKKGGR KPAANRNNTV RGRGRRARRD STSEESFSSS SSD
|
| Detection Method: | |
| Confidence: | 88.045757 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.91891696274037 | bayes_pls_golite062009 |
| protein binding | 1.94427330399472 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.61037669901273 | bayes_pls_golite062009 |
| actin binding | 0.891762677781115 | bayes_pls_golite062009 |
| nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
