| Protein: | DopR2-PB |
| Organism: | Drosophila melanogaster |
| Length: | 539 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DopR2-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
306.0 | [0..1] | [530..1] |
|
Region A: Residues: [1-395] |
1 11 21 31 41 51
| | | | | |
1 MVDDNGSSPE VEGAEGAGAP LLALLRVDGL NQTQTRSPSP SFFGSYNISE DVYFYFNGLP 60
61 TSTELVLNAT TSATSATLSP AMVATGGGGT TTPEPDLSEF LEALPNDRVG LLAFLFLFSF 120
121 ATVFGNSLVI LAVIRERYLH TATNYFITSL AVADCLVGLV VMPFSALYEV LENTWFFGTD 180
181 WCDIWRSLDV LFSTASILNL CVISLDRYWA ITDPFSYPMR MTVKRAAGLI AAVWICSSAI 240
241 SFPAIVWWRA ARDGEMPAYK CTFTEHLGYL VFSSTISFYL PLLVMVFTYC RIYRAAVIQT 300
301 RSLKIGTKQV LMASGELQLT LRIHRGGTTR DQQNQVSGGG GGGGGGGGGG GSLSHSHSHS 360
361 HHHHHNHGGG TTTSTPEEPD DEPLSALHNN GLARH
|
| Detection Method: |  |
| Confidence: | 34.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [396-539] |
1 11 21 31 41 51
| | | | | |
1 RHMGKNFSLS RKLAKFAKEK KAAKTLGIVM GVFIICWLPF FVVNLLSGFC IECIEHEEIV 60
61 SAIVTWLGWI NSCMNPVIYA CWSRDFRRAF VRLLCMCCPR KIRRKYQPTM RSKSQRFATR 120
121 RCYSTCSLHG IQHVRHNSCE QTYI
|
| Detection Method: | |
| Confidence: | 4.95 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
