YRC Public Data Repository - Protein Structure Prediction

Protein:	CG1458-PA
Organism:	Drosophila melanogaster
Length:	133 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1458-PA.

Description	E-value	Query Range	Subject Range
gi\|74002297 - gi\|74002297\|ref\|XP_852575.1\| PREDICTED: similar to CG1458-PA [Canis familiaris]	218.0	[0..1]	[133..112]
gi\|109467679, gi... - gi\|109467679\|ref\|XP_001077768.1\| PREDICTED: similar to CG1458-PA [Rattus norvegicus], gi\|109465611\|r...	216.0	[0..1]	[133..116]
gi\|31874034 - gi\|31874034\|emb\|CAD97935.1\| hypothetical protein [Homo sapiens]	215.0	[0..1]	[133..18]
gi\|55240862, gi\|... - gi\|58385206\|ref\|XP_313782.2\| ENSANGP00000017620 [Anopheles gambiae str. PEST], gi\|55240862\|gb\|EAA091...	214.0	[0..1]	[133..1]
gi\|54637466, gi\|... - gi\|54637466\|gb\|EAL26868.1\| GA13095-PA [Drosophila pseudoobscura], gi\|125772951\|ref\|XP_001357734.1\| G... CISD2_DROPS - CDGSH iron sulfur domain-containing protein 2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=G...	213.0	[0..1]	[133..1]
CISD2_MOUSE - CDGSH iron-sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=1 SV=1	213.0	[0..1]	[133..3]
CISD2_XENTR - CDGSH iron-sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1	212.0	[0..1]	[133..3]
gi\|50746903 - gi\|50746903\|ref\|XP_420668.1\| PREDICTED: similar to Zinc finger, CDGSH-type domain 2 [Gallus gallus]	212.0	[0..1]	[133..3]

Back

Predicted Domain #1

Region A:
Residues: [1-133]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPISHLVKS SLPNYLSSLP VPDSIGGWFK LSFKDWLALI PPTVVVAGLG YTAYLAYCPA  60
   61 ARASCAAKNS GRCNNHIRKN EPKVVDMIDV EDIAEKAAFC RCWKTKNWPY CDGSHGEHNK 120
  121 QTGDNVGPIV IKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.221849
Match:	2qd0A
Description:	No description for 2qd0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits