| Protein: | Vha100-1-PC, Vha... |
| Organism: | Drosophila melanogaster |
| Length: | 855 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vha100-1-PC, Vha....
| Description | E-value | Query Range |
Subject Range |
|
|
810.0 | [0..1] | [852..1] |
|
Region A: Residues: [1-497] |
1 11 21 31 41 51
| | | | | |
1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE 60
61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
121 NFLELTELKH ILRKTQVFFD ESVPTVYKSS GAYSSSKYRR YPQMADNQNE DEQAQLLGEE 180
181 GVRASQPGQN LKLGFVAGVI LRERLPAFER MLWRACRGNV FLRQAMIETP LEDPTNGDQV 240
241 HKSVFIIFFQ GDQLKTRVKK ICEGFRATLY PCPEAPADRR EMAMGVMTRI EDLNTVLGQT 300
301 QDHRHRVLVA AAKNLKNWFV KVRKIKAIYH TLNLFNLDVT QKCLIAECWV PLLDIETIQL 360
361 ALRRGTERSG SSVPPILNRM QTFENPPTYN RTNKFTKAFQ ALIDAYGVAS YREMNPAPYT 420
421 IITFPFLFAV MFGDLGHGAI MALFGLWMIR KEKGLAAQKT DNEIWNIFFG GRYIIFLMGV 480
481 FSMYTGLIYN DIFSKSL
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [498-724] |
1 11 21 31 41 51
| | | | | |
1 NIFGSHWHLS YNKSTVMENK FLQLSPKGDY EGAPYPFGMD PIWQVAGANK IIFHNAYKMK 60
61 ISIIFGVIHM IFGVVMSWHN HTYFRNRISL LYEFIPQLVF LLLLFFYMVL LMFIKWIKFA 120
121 ATNDKPYSEA CAPSILITFI DMVLFNTPKP PPENCETYMF MGQHFIQVLF VLVAVGCIPV 180
181 MLLAKPLLIM QARKQANVQP IAGATSDAEA GGVSNSGSHG GGGGHEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [725-855] |
1 11 21 31 41 51
| | | | | |
1 EEELSEIFIH QSIHTIEYVL GSVSHTASYL RLWALSLAHA QLAEVLWTMV LSIGLKQEGP 60
61 VGGIVLTCVF AFWAILTVGI LVLMEGLSAF LHTLRLHWVE FQSKFYKGQG YAFQPFSFDA 120
121 IIENGAAAAE E
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
