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View Structure Prediction Details

Protein: WASp-PC
Organism: Drosophila melanogaster
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WASp-PC.

Description E-value Query
Range
Subject
Range
WASp-PB, WASp-PA... - The gene WASp is referred to in FlyBase by the symbol Dmel\WASp (CG1520, FBgn0024273). It is a prote...
gi|220957180, gi... - gi|220957180|gb|ACL91133.1| WASp-PA [synthetic construct], gi|220947946|gb|ACL86516.1| WASp-PA [synt...
252.0 [0..3] [494..36]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKLKTLNT AVVQIYKTEG SAHAHWKKRH TGVVCFVKDS AIRSYFMRAY CLIKNELIWE  60
   61 HEIYDGMEVV KSRPFLLTFE GSDGHVGLNF VSEEECDSFF RIVDATI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 2ifsA
Description: No description for 2ifsA was found.

Predicted Domain #2
Region A:
Residues: [108-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETRNRKRQEK RNRQKSQQAP NAPLPQVQRE PARPPPMQGG LSSTDGVQLR NNKINSVTLT  60
   61 PAPAPAQSKN FLSSSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [184-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLGNNAKDKK RKVTKADISR PTNFVHLSHV GWDAQKGFDL AGNENDEVLN EFFVKAGVSE  60
   61 VELKDRDTRA FIYDFIQSNN VLASVKQYSV ESPTETAAPM PPPVPTRHPS NGNQRTAPPL 120
  121 PPARQPPPAV PVTVPGAARA PPPPNRPPPI STAPPPPPVS APVVAPPPPP PPPPAAVPPP 180
  181 PPPPMPV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.03
Match: 1ej5A
Description: Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [371-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEIPVITTTH APTQAARPAA PAAPDPRNAL MDAIRKGTQL KKVDTTALST GSGDSRSDLM  60
   61 KDIRQGTVLK PAKERELGSQ RNSDSGAGTD ALADALRRAL AARGNAIHSD EDETESSDNE 120
  121 GEWD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle