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View Structure Prediction Details

Protein: CG9990-PA
Organism: Drosophila melanogaster
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9990-PA.

Description E-value Query
Range
Subject
Range
CG9990-PB - This gene is referred to in FlyBase by the symbol Dmel\CG9990 (CG9990, FBgn0039594). It is a protein...
542.0 [0..34] [808..3]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKKEATLS QQQTQQPIMD LERIKRHFSW SDPSAIISTD SAMAATNNDG GTQPNAVAAW  60
   61 GAPANGPRNT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.39794
Match: 2hydA
Description: No description for 2hydA was found.

Predicted Domain #2
Region A:
Residues: [71-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAAVSVRHAF KAYGKKKNAN QVLNNLNMTV PKGTIYGLLG ASGCGKTTLL SCIVGRRYMD  60
   61 AGEIFVLGGK PGTRGSGVPG KRVGYMPQEI ALYGEFSIQE TMMYFGWIFG MDTKEILERL 120
  121 QFLLNFLDLP SEKRLVKNLS GGQQRRVSFA VALMHDPELL ILDEPTVGVD PLLRQSIWNH 180
  181 LVHITKAGQK TVIITTHYIE EARQAHTIGL MRSGHLLAEE SPSVLLSIYK CISLEEVFLK 240
  241 LSRIQSQKGD VTHVNFSNNI SLHAMAFGSK MDKPSSSQEG GVVGLNFHQS KEVLINDSNG 300
  301 SIYTLNQEPY SPPPSRRNNN PNDEESCQDC YSNLCKITSK GKIRALLTKN MLRMWR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.09691
Match: 1z47A
Description: Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [427-526]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVGVMLFIFA LPVMQVILFC LAIGRDPQGL NLAIVNGEMN DTVRENCYWE DGCHFKNLGC  60
   61 RYLSHLNTSV VKTYYEDLDD AKEAVRKGTA WGAVYISENF 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [527-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDAFIARANL GRDSDDETID SSEVKVWLDM SNQQIGVMLN RDIQLAFRDF AMGLLGQCGS  60
   61 NPKLGDVPIQ FRDPIYGTMN PSFTDFVAPG VILTIVFFLA VALTSSALII ERTEGLLDRS 120
  121 WVAGVSPFEI LFSHVITQFV VMCGQTTLVL IFMLVVFGVT NNGDLFWVIV LTLLQGMCGM 180
  181 CFGFLISSVC ELERNAIQLA LGSFYPTLLL SGVIWPIEGM PVVLRYISLC LPLTLATSSL 240
  241 RSILTRGWAI LESDVYIGYV STLSWIVGFL VLTLLVLRAK RG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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