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View Structure Prediction Details

Protein: Noa36-PA
Organism: Drosophila melanogaster
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Noa36-PA.

Description E-value Query
Range
Subject
Range
gi|109508688, gi... - gi|109508688|ref|XP_001073428.1| PREDICTED: similar to nucleolar autoantigen 36 [Rattus norvegicus],...
489.0 [0..1] [265..131]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKKTGQRK KAEKQKLRLK EIRSREVPLA DLPCNAPMEC DKCEKKQKSR AFCYFCQSIQ  60
   61 RLPICAQCGK IKCMLKTGDC VVKHPGVYTT GLGMVGAICD FCEAWVCHGR KCLQNHACTC 120
  121 PLQNATCLEC ERGVWEHGGR IFKCSFCNGF LCEDDQFEHQ ASCQVLESEN YKCQSCNKLG 180
  181 QYSCLRCKTC YCEDHVRRKG FKYDKNKPIP CPKCNYDTSV TKDLSMSTRS HKFGRQQQGG 240
  241 N

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.23
Match: 2ob7A
Description: No description for 2ob7A was found.

Predicted Domain #2
Region A:
Residues: [242-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDDEEGYGGY YGAGGSGYYG GAASGGYSYG GDDDEDESDG DYDDESDEDD DDDEEEDETT  60
   61 ESEPEKETDK KATK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.966
Match: 1qd7B
Description: 30S subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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