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View Structure Prediction Details

Protein: mRpS22-PA
Organism: Drosophila melanogaster
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS22-PA.

Description E-value Query
Range
Subject
Range
gi|54637647, gi|... - gi|54637647|gb|EAL27049.1| GA11515 [Drosophila pseudoobscura pseudoobscura], gi|125773309|ref|XP_001...
gi|54637647|gb|E... - GA11515-PA [Drosophila pseudoobscura], GA11515 [Drosophila pseudoobscura pseudoobscura]
568.0 [0..1] [393..1]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLLRSLRQL NGLQGVRQAI RQVSSAPTKP AALQYERDPQ PLFTDAETQR LLQSMTQLNL  60
   61 DKVYRKRTVP DNSSETKFMS NEQLDNEFQN LVVRAQQILQ MPPIVQIKKD VERVIAKDTA 120
  121 LKDFANSKFV FTDITFGRRQ S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERKVIVRDMD GTLAYATLDT TKRMNQLYFP LEGRQSYTPR MFALEELLAK CLAEHKYEFI  60
   61 LDRLLVQYEP HEPEFHNISA RVFEHLNESK EFDLLRSTRH FGPMAFFYAW HRCIDDLLYD 120
  121 MIRRDYLHNA VELIALSYKL HNIPVEYQAT LTELGKLHAT PAESALAELR SVFRRHDNKQ 180
  181 NIEQEIHTAI GKTEHDFAAD EISLKFIEQY IASEHALKKV QLELAVQTLK EVNREKLMLF 240
  241 QGLKKAHGVQ AS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle