Protein: | raps-PA |
Organism: | Drosophila melanogaster |
Length: | 658 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for raps-PA.
Description | E-value | Query Range |
Subject Range |
|
339.0 | [0..1] | [658..1] |
Region A: Residues: [1-290] |
1 11 21 31 41 51 | | | | | | 1 MSSLSASAEN VSSLGLGSGG GGTTSHDGNS QQGSGSDGGS SMCLELALEG ERLCKAGDCR 60 61 AGVAFFQAAI QAGTEDLRTL SAIYSQLGNA YFYLGDYNKA MQYHKHDLTL AKSMNDRLGE 120 121 AKSSGNLGNT LKVMGRFDEA AICCERHLTL ARQLGDRLSE GRALYNLGNV YHAKGKHLGQ 180 181 RNPGKFGDDV KEALTRAVEF YQENLKLMRD LGDRGAQGRA CGNLGNTYYL LGDFQAAIEH 240 241 HQERLRIARE FGDRAAERRA NSNLGNSHIF LGQFEDAAEH YKRTLALAVE |
Detection Method: | |
Confidence: | 6.39794 |
Match: | 1ouvA |
Description: | Helicobacter cysteine rich protein C (HcpC) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.32969330984971 | bayes_pls_golite062009 |
protein binding | 0.559882636047776 | bayes_pls_golite062009 |
Region A: Residues: [291-351] |
1 11 21 31 41 51 | | | | | | 1 LGEREVEAQS CYSLGNTYTL LHEFNTAIEY HNRHLAIAQE LGDRIGEARA CWSLGNAHSA 60 61 I |
Detection Method: | |
Confidence: | 2.5 |
Match: | 2ifuA |
Description: | No description for 2ifuA was found. |
Region A: Residues: [352-584] |
1 11 21 31 41 51 | | | | | | 1 GGHERALKYA EQHLQLAKEL HDPVGESTAR VNISDLRKLL GMPDSEPSPT EEEARSTASD 60 61 HSASGNQSDG SENSQGRMVR VRRQSMEQLD LIKITPDGKR MQEEKLRAQA TRKAKDDDFF 120 121 EMLSRSQSKR MDDQRCSIKV NPAGAPAVAT GATRKPLVQQ NSLFVDPTNL PGLKSPSSAN 180 181 PSAIGHGPLA RSATTTQQPD DDFLDMLMRC QGSRLEEQRS ELPRPNVTMD AEA |
Detection Method: | |
Confidence: | 5.69897 |
Match: | 1xnfA |
Description: | Crystal structure of E.coli TPR-protein NlpI |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.07985546140154 | bayes_pls_golite062009 |
protein binding | 1.6279032205159 | bayes_pls_golite062009 |
signal sequence binding | 0.84653836601323 | bayes_pls_golite062009 |
peptide binding | 0.646032841722384 | bayes_pls_golite062009 |
Region A: Residues: [585-658] |
1 11 21 31 41 51 | | | | | | 1 EAPPRSVPEA AVPGAPRGQT GRGATVPDED FFSLIMKVQS GRMEDQRASI PFRNANNNNN 60 61 SRSNNNGSAG GAGK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.