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View Structure Prediction Details

Protein: Gr98c-PA
Organism: Drosophila melanogaster
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr98c-PA.

Description E-value Query
Range
Subject
Range
gi|54638054, gi|... - gi|54638054|gb|EAL27456.1| GA15973-PA [Drosophila pseudoobscura], gi|125774119|ref|XP_001358318.1| G...
202.0 [0..9] [393..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMEAKRSRL LTTARPYLQV LSLFGLTPPA EFFTRTLRKR RRFCWMAGYS LYLIAILLMV  60
   61 FYEFHANIVS LHLEIYKFHV EDFSKVMGRT QKFLIVAIAT CNQLNILLNY GRLGLIYDEI 120
  121 ANLDLGIDKS SKNFCGKSHW WSFRLRLTLS IGLWMVIIIG VIPRLTLGRA GPFFHWVNQV 180
  181 LTQIILIMLQ LKGPEYCLFV LLVYELILRT RHVLEQLKDD LEDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DCGARIQELC VTLKQNQLLI GRIWRLVDEI GAYFRWSMTL LFLYNGLTIL HVVNWAIIRS  60
   61 IDPNDCCQLN RLGSITFLSF NLLLTCFFSE CCVKTYNSIS YILHQIGCLP TAEEFQMLKM 120
  121 GLKEYILQMQ HLKLLFTCGG LFDINIKLFG GMLVTLCGYV IIIVQFKIQD FALIGYRQNT 180
  181 SDTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle