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View Structure Prediction Details

Protein: Gr98a-PA
Organism: Drosophila melanogaster
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr98a-PA.

Description E-value Query
Range
Subject
Range
gi|54638051, gi|... - gi|54638051|gb|EAL27453.1| GA12669-PA [Drosophila pseudoobscura], gi|125774113|ref|XP_001358315.1| G...
171.0 [0..1] [391..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQMSGELHA ASLLYMRRLM KCLGMLPFGQ NLFSKGFCYV LLFVSLGFSS YWRFSFDYEF  60
   61 DYDFLNDRFS STIDLSNFVA LVLGHAIIVL ELLWGNCSKD VDRQLQAIHS QIKLQLGTSN 120
  121 STDRVRRYCN WIYGSLIIRW LIFIVVTIY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [150-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNRALTINAT YSELVFLARF SEFTLYCAVI LFIYQELIVG GSNVLDELYR TRYEMWSIRR  60
   61 LSLQKLAKLQ AIHNSLWQAI RCLECYFQLS LITLLMKFFI DTSALPYWLY LSRVEHTRVA 120
  121 VQHYVATVEC IKLLEIVVPC YLCTRCDAMQ RKFLSMFYTV TTDRRSSQLN AALRSLNLQL 180
  181 SQEKYKFSAG GMVDINTEML GKFFFGMISY IVICIQFSIN FRAKKMSNEQ MSQNITSTSA 240
  241 PI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle