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View Structure Prediction Details

Protein: Hmu-PA
Organism: Drosophila melanogaster
Length: 579 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hmu-PA.

Description E-value Query
Range
Subject
Range
gi|85822205 - gi|85822205|gb|ABC84591.1| hemomucin protein [Glossina morsitans morsitans]
440.0 [0..1] [579..1]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLYALRVR IMNFMIFFLL IILMPGLPPR TTFPFKDYIV TPPKDLKGAL ESNFHLEGAE  60
   61 RLLEGRVYGP ECLIARNNEI YTGIHGGEVI KLTSNHVTHV TKIGQPCEDI YEESRCGRPL 120
  121 GLAFDTQGNN LIIADAYYGL WQVDLGTNKK TLLVSPAQEL AGKSINRPAK IFNGVTVSKE 180
  181 GDVYWTDSSS DFTIEDLVFA SFANPSGRLF KYNRSKNVSE VLLDELAFAN GLALSPNEDF 240
  241 IVVAETGAMR LTKYHLKGAK AGQSEVFVDG LPGLPDNLTP DAEGIWVPLV QSADSEHPNG 300
  301 FTLFTRFPSV RLFLARMLAL FELPFRYLNS VYPNKFSQRF VHFVGHMESI TVLAPKRTTV 360
  361 VRVDWNGNIV GSLHGFDKSA ATVSHVLEFQ DFLFLGSPTN QYLARVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 2fp8A
Description: No description for 2fp8A was found.

Predicted Domain #2
Region A:
Residues: [408-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPKAKQPTLK VRNVRVEGEG LEASIGVPPS KATPKPKAAP STTTPKPTTT TTTTTPKPTT  60
   61 KTTTTTTTPK PTTTTTTKKP TTTTTTTTTT PKPTTTKPPT AKPSTTTTTT TTPKPTTTTT 120
  121 PTTPTPEPSK PKVKRTVPEK PAPVEEDIPS DTQPPKKEKL KVINKQGVNV EL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.33
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle