| Protein: | gb-PA, FBpp0311411 |
| Organism: | Drosophila melanogaster |
| Length: | 517 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gb-PA, FBpp0311411.
| Description | E-value | Query Range |
Subject Range |
|
|
325.0 | [0..19] | [433..937] |
|
Region A: Residues: [1-429] |
1 11 21 31 41 51
| | | | | |
1 MPAADELQSP SSEMVLLTPS SGNPPSSIAQ PAANPAEKAQ CREGSAESDS SRVVIKKQLG 60
61 LLEGVAIILG IIFGSGIFVS PKGVIREVES VGASLVIWVL CGLLSMIGAL CYAELGTAIP 120
121 KSGGDYAYIF EAYGSLPAFL YLWDAMMIFV PTTNAIMGLT FASYVLEPFF GGACEIPKIA 180
181 LQLLAAITIC FLTYLNSYYM KVTTKMQNVI MFTKIAALVL IILVGLVWMM MGNVENFTRP 240
241 FDNTETDPGK MSVAFYSGIF SYAGWNYLNF MTEELRDPYR NLPRAIYISL PLVTGIYVLA 300
301 NVAYLAVLSP SEMIASNAIA VTFGDKILGV FSLIIPLMVA ISAFGGLSVH IMTSSRICFV 360
361 GARNGHMPAI LSHISVKSYT PLPSLVFLCF LSIVMLVVSD VYVLITYASI VESFFIMLSV 420
421 SAVLYFRYT
|
| Detection Method: |  |
| Confidence: | 1.21 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [430-517] |
1 11 21 31 41 51
| | | | | |
1 RPCMERPIKV AMWIPALFVI VCAFLVVVPI YVAPYEVGMG VLITIIGIPF YYVGVVWKNK 60
61 PKWVQSTIDS VTFTCQKLFM SAKEEKED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
