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View Structure Prediction Details

Protein: spz-PA
Organism: Drosophila melanogaster
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spz-PA.

Description E-value Query
Range
Subject
Range
gi|9754886 - gi|9754886|gb|AAF98126.1| spatzle alternatively spliced isoform 11.6 [Drosophila melanogaster]
469.0 [0..1] [326..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTPMWISLF KVLLLLFAFF ATYEAKEYER IIKELFTITN DEGVVLFNTS ADSAPFMPIP  60
   61 TQHDDPTQKQ KQNQNQSPIP ETNRHYHQYH SLIQPDQYFK VQRSPNGKLN LVFNDTFVSL 120
  121 QRTDTEVQSE QPIPPRHPSD TFVFPDSPIA KYRPPQSPAR PLRNDTKEHN PCAKDESQHL 180
  181 RNFCTNVDDY PDLSGLTHKL KNNFAKF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [208-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSNDLQPTDV SSRVGGSDER FLCRSIRKLV YPKKGLRADD TWQLIVNNDE YKQAIQIEEC  60
   61 EGADQPCDFA ANFPQSYNPI CKQHYTQQTL ASIKSDGELD VVQNSFKIPS CCKCALKTG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 1aocA
Description: Coagulogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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