YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG6277-PA
Organism: Drosophila melanogaster
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6277-PA.

Description E-value Query
Range
Subject
Range
CG6271-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6271 (CG6271, FBgn0039476). It is a protein...
gi|220944414, gi... - gi|220954368|gb|ACL89727.1| CG6271-PA [synthetic construct], gi|220944414|gb|ACL84750.1| CG6271-PA [...
302.0 [0..1] [341..1]

Back

Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFLILAFF ALAASAIPIK ESERVHGENG WYVPQEDGTS EWVDMDVAEQ WMEAQELLES  60
   61 RGLTTVPVKF YLYTSSNPTK GKKITASTKS IDASSFNSAH PTRFVIHGWT QSYTASMNKD 120
  121 IRSAWLSRGD YNVIVVDWAR ARSVDYATSV LAVAATGKKV AKMINFLKDN HGLNLNDLYV 180
  181 IGHSLGAHVA GYAGKNTDGQ VHTIIGLDPA LPLFSYNKPN KRLNSDDAWY VESIQTNGGT 240
  241 LGFLKPIGKG AFYPNGGKTQ PGCGLDLTGA CSHGRSTTYY AEAVSEDNFG TMKCGDYEEA 300
  301 VSKECGSTYS SVRMGADTNA YMVEGDYYVP VNSKAPFGMI N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.0
Match: 1lpaB
Description: Pancreatic lipase, C-terminal domain; Pancreatic lipase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.56714651547107 bayes_pls_golite062009
catalytic activity 1.22413317508498 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle